Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 CD81-209ENST00000492627 886 ntTSL 3 BASIC13.32□□□□□ -0.28
CTSBP07858 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.32□□□□□ -0.28
CTSBP07858 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 RN7SL357P-201ENST00000581065 298 ntBASIC13.32□□□□□ -0.28
CTSBP07858 RN7SL470P-201ENST00000583069 259 ntBASIC13.32□□□□□ -0.28
CTSBP07858 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.32□□□□□ -0.28
CTSBP07858 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.32□□□□□ -0.28
CTSBP07858 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CTSBP07858 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.32□□□□□ -0.28
CTSBP07858 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.32□□□□□ -0.28
CTSBP07858 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CTSBP07858 KRT8P24-201ENST00000560290 1559 ntBASIC13.32□□□□□ -0.28
CTSBP07858 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.32□□□□□ -0.28
CTSBP07858 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.32□□□□□ -0.28
CTSBP07858 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CTSBP07858 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.32□□□□□ -0.28
CTSBP07858 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC13.32□□□□□ -0.28
CTSBP07858 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CTSBP07858 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CTSBP07858 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CTSBP07858 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CTSBP07858 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CTSBP07858 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CTSBP07858 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CTSBP07858 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.31□□□□□ -0.28
CTSBP07858 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 RNVU1-8-201ENST00000364272 125 ntBASIC13.31□□□□□ -0.28
CTSBP07858 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.31□□□□□ -0.28
CTSBP07858 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.31□□□□□ -0.28
CTSBP07858 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.31□□□□□ -0.28
CTSBP07858 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.31□□□□□ -0.28
CTSBP07858 AC004837.1-201ENST00000446267 564 ntBASIC13.31□□□□□ -0.28
CTSBP07858 GRPEL2P1-201ENST00000453145 339 ntBASIC13.31□□□□□ -0.28
CTSBP07858 LDHBP1-201ENST00000455730 1119 ntBASIC13.31□□□□□ -0.28
CTSBP07858 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC13.31□□□□□ -0.28
CTSBP07858 RNA5SP406-201ENST00000516106 112 ntBASIC13.31□□□□□ -0.28
CTSBP07858 AL132994.1-201ENST00000554098 400 ntBASIC13.31□□□□□ -0.28
CTSBP07858 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.31□□□□□ -0.28
CTSBP07858 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.31□□□□□ -0.28
CTSBP07858 NUDT4P2-201ENST00000578341 546 ntBASIC13.31□□□□□ -0.28
CTSBP07858 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.31□□□□□ -0.28
CTSBP07858 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.31□□□□□ -0.28
CTSBP07858 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.31□□□□□ -0.28
CTSBP07858 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.31□□□□□ -0.28
CTSBP07858 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CTSBP07858 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.31□□□□□ -0.28
CTSBP07858 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CTSBP07858 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
CTSBP07858 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CTSBP07858 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CTSBP07858 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CTSBP07858 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CTSBP07858 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSBP07858 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSBP07858 AC004554.1-201ENST00000422830 1468 ntBASIC13.3□□□□□ -0.28
CTSBP07858 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSBP07858 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSBP07858 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSBP07858 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTSBP07858 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTSBP07858 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSBP07858 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.3□□□□□ -0.28
CTSBP07858 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSBP07858 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSBP07858 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSBP07858 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTSBP07858 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CTSBP07858 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CTSBP07858 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms