Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
RB1P06400 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.8□□□□□ -0.04
RB1P06400 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
RB1P06400 PES1P2-201ENST00000449745 1735 ntBASIC14.8□□□□□ -0.04
RB1P06400 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
RB1P06400 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.8□□□□□ -0.04
RB1P06400 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
RB1P06400 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.8□□□□□ -0.04
RB1P06400 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RB1P06400 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.8□□□□□ -0.04
RB1P06400 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RB1P06400 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
RB1P06400 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.79□□□□□ -0.04
RB1P06400 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 AC004522.1-201ENST00000419978 654 ntBASIC14.79□□□□□ -0.04
RB1P06400 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.79□□□□□ -0.04
RB1P06400 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.79□□□□□ -0.04
RB1P06400 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC14.79□□□□□ -0.04
RB1P06400 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RB1P06400 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RB1P06400 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.79□□□□□ -0.04
RB1P06400 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.79□□□□□ -0.04
RB1P06400 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC14.79□□□□□ -0.04
RB1P06400 AC079414.2-201ENST00000567157 1104 ntBASIC14.79□□□□□ -0.04
RB1P06400 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RB1P06400 FAM226B-201ENST00000602508 1490 ntBASIC14.79□□□□□ -0.04
RB1P06400 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RB1P06400 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 AC011498.7-201ENST00000624986 2027 ntBASIC14.79□□□□□ -0.04
RB1P06400 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RB1P06400 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RB1P06400 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 AC015909.5-201ENST00000624336 2266 ntBASIC14.78□□□□□ -0.04
RB1P06400 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RB1P06400 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 AC099063.4-201ENST00000641099 1602 ntBASIC14.78□□□□□ -0.04
RB1P06400 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RB1P06400 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC14.78□□□□□ -0.04
RB1P06400 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 SNORA57-201ENST00000383870 149 ntBASIC14.78□□□□□ -0.04
RB1P06400 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 AC103563.1-201ENST00000429316 123 ntBASIC14.78□□□□□ -0.04
RB1P06400 AC092810.2-201ENST00000431570 362 ntBASIC14.78□□□□□ -0.04
RB1P06400 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC14.78□□□□□ -0.04
RB1P06400 KRT19P4-201ENST00000443208 943 ntBASIC14.78□□□□□ -0.04
RB1P06400 TPT1P11-201ENST00000458482 498 ntBASIC14.78□□□□□ -0.04
RB1P06400 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC14.78□□□□□ -0.04
RB1P06400 RN7SL602P-201ENST00000578326 324 ntBASIC14.78□□□□□ -0.04
RB1P06400 RN7SL718P-201ENST00000581254 303 ntBASIC14.78□□□□□ -0.04
RB1P06400 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 NEK4P3-201ENST00000604859 544 ntBASIC14.78□□□□□ -0.04
RB1P06400 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.78□□□□□ -0.04
RB1P06400 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RB1P06400 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RB1P06400 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms