Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AC135983.4-201ENST00000564116 1262 ntBASIC16.92■□□□□ 0.3
POLR3DP05423 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
POLR3DP05423 YRDCP1-201ENST00000621419 643 ntBASIC16.92■□□□□ 0.3
POLR3DP05423 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.92■□□□□ 0.3
POLR3DP05423 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
POLR3DP05423 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
POLR3DP05423 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.92■□□□□ 0.3
POLR3DP05423 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.92■□□□□ 0.3
POLR3DP05423 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
POLR3DP05423 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 AC007952.5-201ENST00000572818 1486 ntBASIC16.92■□□□□ 0.3
POLR3DP05423 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
POLR3DP05423 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
POLR3DP05423 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
POLR3DP05423 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
POLR3DP05423 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
POLR3DP05423 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
POLR3DP05423 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR3DP05423 AC092053.3-201ENST00000641308 4975 ntBASIC16.91■□□□□ 0.3
POLR3DP05423 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
POLR3DP05423 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.91■□□□□ 0.3
POLR3DP05423 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 Z69890.1-201ENST00000382990 339 ntBASIC16.91■□□□□ 0.3
POLR3DP05423 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR3DP05423 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.91■□□□□ 0.3
POLR3DP05423 AC079112.1-201ENST00000454972 939 ntBASIC16.91■□□□□ 0.3
POLR3DP05423 ORAOV1P1-201ENST00000503108 395 ntBASIC16.91■□□□□ 0.3
POLR3DP05423 AL133467.4-201ENST00000602953 725 ntBASIC16.91■□□□□ 0.3
POLR3DP05423 MIR7845-201ENST00000618396 99 ntBASIC16.91■□□□□ 0.3
POLR3DP05423 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.91■□□□□ 0.3
POLR3DP05423 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.91■□□□□ 0.3
POLR3DP05423 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
POLR3DP05423 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.91■□□□□ 0.3
POLR3DP05423 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
POLR3DP05423 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
POLR3DP05423 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.9■□□□□ 0.3
POLR3DP05423 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.9■□□□□ 0.3
POLR3DP05423 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 RPL7P35-201ENST00000446943 740 ntBASIC16.9■□□□□ 0.3
POLR3DP05423 AC138701.2-201ENST00000553634 226 ntBASIC16.9■□□□□ 0.3
POLR3DP05423 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.9■□□□□ 0.3
POLR3DP05423 RN7SL555P-201ENST00000584742 339 ntBASIC16.9■□□□□ 0.3
POLR3DP05423 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 MIR6842-201ENST00000612539 65 ntBASIC16.9■□□□□ 0.3
POLR3DP05423 AC011491.1-203ENST00000637688 543 ntBASIC16.9■□□□□ 0.3
POLR3DP05423 AP001184.1-201ENST00000637936 376 ntBASIC16.9■□□□□ 0.3
POLR3DP05423 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
POLR3DP05423 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.9■□□□□ 0.3
POLR3DP05423 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.9■□□□□ 0.3
POLR3DP05423 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.9■□□□□ 0.3
POLR3DP05423 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.9■□□□□ 0.3
POLR3DP05423 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.9■□□□□ 0.3
POLR3DP05423 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.9■□□□□ 0.3
POLR3DP05423 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
POLR3DP05423 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms