Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOA1P02647 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOA1P02647 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
APOA1P02647 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOA1P02647 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOA1P02647 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
APOA1P02647 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOA1P02647 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
APOA1P02647 CACNA1G-204ENST00000359106 7648 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOA1P02647 AC022364.1-202ENST00000617468 2409 ntBASIC12.68□□□□□ -0.38
APOA1P02647 MSNP1-201ENST00000511640 1732 ntBASIC12.68□□□□□ -0.38
APOA1P02647 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.68□□□□□ -0.38
APOA1P02647 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOA1P02647 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC12.68□□□□□ -0.38
APOA1P02647 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
APOA1P02647 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 AC073862.5-201ENST00000624129 2027 ntBASIC12.67□□□□□ -0.38
APOA1P02647 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.67□□□□□ -0.38
APOA1P02647 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.67□□□□□ -0.38
APOA1P02647 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC12.67□□□□□ -0.38
APOA1P02647 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.67□□□□□ -0.38
APOA1P02647 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
APOA1P02647 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.67□□□□□ -0.38
APOA1P02647 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.67□□□□□ -0.38
APOA1P02647 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
APOA1P02647 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.67□□□□□ -0.38
APOA1P02647 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
APOA1P02647 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.67□□□□□ -0.38
APOA1P02647 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.67□□□□□ -0.38
APOA1P02647 RPL37AP1-201ENST00000412502 279 ntBASIC12.67□□□□□ -0.38
APOA1P02647 GPS2P2-201ENST00000430745 888 ntBASIC12.67□□□□□ -0.38
APOA1P02647 RN7SL618P-201ENST00000477850 296 ntBASIC12.67□□□□□ -0.38
APOA1P02647 AL512361.1-201ENST00000554200 418 ntBASIC12.67□□□□□ -0.38
APOA1P02647 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.67□□□□□ -0.38
APOA1P02647 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.67□□□□□ -0.38
APOA1P02647 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.67□□□□□ -0.38
APOA1P02647 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.67□□□□□ -0.38
APOA1P02647 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.67□□□□□ -0.38
APOA1P02647 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.67□□□□□ -0.38
APOA1P02647 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.67□□□□□ -0.38
APOA1P02647 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 FLJ30679-201ENST00000624773 1980 ntBASIC12.67□□□□□ -0.38
APOA1P02647 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
APOA1P02647 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOA1P02647 AC092117.1-201ENST00000621230 3250 ntBASIC12.66□□□□□ -0.38
APOA1P02647 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.66□□□□□ -0.38
APOA1P02647 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOA1P02647 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
APOA1P02647 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
APOA1P02647 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOA1P02647 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
APOA1P02647 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
APOA1P02647 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOA1P02647 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.66□□□□□ -0.38
APOA1P02647 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOA1P02647 AC139712.1-201ENST00000378256 1875 ntBASIC12.66□□□□□ -0.38
APOA1P02647 POM121L4P-202ENST00000427789 1891 ntBASIC12.66□□□□□ -0.38
APOA1P02647 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.66□□□□□ -0.38
APOA1P02647 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.66□□□□□ -0.38
APOA1P02647 AC026992.2-203ENST00000563004 2419 ntBASIC12.66□□□□□ -0.38
APOA1P02647 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOA1P02647 NPC1L1-204ENST00000546276 4826 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
APOA1P02647 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
APOA1P02647 AL139094.1-201ENST00000405549 1188 ntBASIC12.66□□□□□ -0.38
APOA1P02647 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
APOA1P02647 AL627223.1-201ENST00000416693 442 ntBASIC12.66□□□□□ -0.38
APOA1P02647 AC023274.1-201ENST00000418278 595 ntBASIC12.66□□□□□ -0.38
APOA1P02647 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.66□□□□□ -0.38
APOA1P02647 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms