Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.68□□□□□ -0.38
ZIC3O60481 MIR4265-201ENST00000582152 99 ntBASIC12.68□□□□□ -0.38
ZIC3O60481 MIR2392-201ENST00000584881 84 ntBASIC12.68□□□□□ -0.38
ZIC3O60481 AC092171.5-201ENST00000608012 942 ntBASIC12.68□□□□□ -0.38
ZIC3O60481 AC073352.2-201ENST00000609385 439 ntBASIC12.68□□□□□ -0.38
ZIC3O60481 AC025262.2-201ENST00000623975 1056 ntBASIC12.68□□□□□ -0.38
ZIC3O60481 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.68□□□□□ -0.38
ZIC3O60481 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
ZIC3O60481 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.68□□□□□ -0.38
ZIC3O60481 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.68□□□□□ -0.38
ZIC3O60481 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.68□□□□□ -0.38
ZIC3O60481 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ZIC3O60481 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 PDXDC2P-206ENST00000534700 1315 ntBASIC12.67□□□□□ -0.38
ZIC3O60481 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.67□□□□□ -0.38
ZIC3O60481 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC12.67□□□□□ -0.38
ZIC3O60481 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.67□□□□□ -0.38
ZIC3O60481 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ZIC3O60481 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.67□□□□□ -0.38
ZIC3O60481 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.67□□□□□ -0.38
ZIC3O60481 AC069218.1-201ENST00000435269 762 ntBASIC12.67□□□□□ -0.38
ZIC3O60481 AC078991.1-201ENST00000437297 610 ntBASIC12.67□□□□□ -0.38
ZIC3O60481 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.67□□□□□ -0.38
ZIC3O60481 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.67□□□□□ -0.38
ZIC3O60481 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.67□□□□□ -0.38
ZIC3O60481 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.67□□□□□ -0.38
ZIC3O60481 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.67□□□□□ -0.38
ZIC3O60481 AL031713.1-201ENST00000564813 661 ntBASIC12.67□□□□□ -0.38
ZIC3O60481 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 AC087392.5-201ENST00000612517 489 ntBASIC12.67□□□□□ -0.38
ZIC3O60481 MIR6842-201ENST00000612539 65 ntBASIC12.67□□□□□ -0.38
ZIC3O60481 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.67□□□□□ -0.38
ZIC3O60481 YRDCP1-201ENST00000621419 643 ntBASIC12.67□□□□□ -0.38
ZIC3O60481 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.67□□□□□ -0.38
ZIC3O60481 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.67□□□□□ -0.38
ZIC3O60481 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ZIC3O60481 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
ZIC3O60481 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.66□□□□□ -0.38
ZIC3O60481 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ZIC3O60481 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms