Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 RPL17P45-201ENST00000586289 509 ntBASIC14.88□□□□□ -0.03
CLDN5O00501 GOLGA8IP-202ENST00000611635 2100 ntBASIC14.88□□□□□ -0.03
CLDN5O00501 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.88□□□□□ -0.03
CLDN5O00501 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 AC073869.1-201ENST00000415574 2762 ntBASIC14.88□□□□□ -0.03
CLDN5O00501 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.88□□□□□ -0.03
CLDN5O00501 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLDN5O00501 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN5O00501 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLDN5O00501 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN5O00501 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN5O00501 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CLDN5O00501 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLDN5O00501 TBC1D27-202ENST00000424239 1573 ntBASIC14.87□□□□□ -0.03
CLDN5O00501 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLDN5O00501 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN5O00501 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN5O00501 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 PPP1R2P4-201ENST00000424051 595 ntBASIC14.87□□□□□ -0.03
CLDN5O00501 RN7SL181P-201ENST00000462921 277 ntBASIC14.87□□□□□ -0.03
CLDN5O00501 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN5O00501 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN5O00501 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN5O00501 AC145285.5-201ENST00000562217 361 ntBASIC14.87□□□□□ -0.03
CLDN5O00501 HERC2P11-201ENST00000562845 725 ntBASIC14.87□□□□□ -0.03
CLDN5O00501 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.87□□□□□ -0.03
CLDN5O00501 AC100756.2-201ENST00000569537 736 ntBASIC14.87□□□□□ -0.03
CLDN5O00501 MIR3180-2-201ENST00000581748 88 ntBASIC14.87□□□□□ -0.03
CLDN5O00501 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN5O00501 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN5O00501 AC087045.2-201ENST00000606279 1003 ntBASIC14.87□□□□□ -0.03
CLDN5O00501 AC025262.2-201ENST00000623975 1056 ntBASIC14.87□□□□□ -0.03
CLDN5O00501 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLDN5O00501 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.87□□□□□ -0.03
CLDN5O00501 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLDN5O00501 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN5O00501 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.87□□□□□ -0.03
CLDN5O00501 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLDN5O00501 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN5O00501 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CLDN5O00501 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLDN5O00501 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CLDN5O00501 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN5O00501 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN5O00501 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.86□□□□□ -0.03
CLDN5O00501 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.86□□□□□ -0.03
CLDN5O00501 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLDN5O00501 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms