Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LINC01815-202ENST00000641468 1409 ntBASIC11.43□□□□□ -0.58
SRRM4A7MD48 AC005562.1-201ENST00000583030 3219 ntBASIC11.43□□□□□ -0.58
SRRM4A7MD48 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
SRRM4A7MD48 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 POM121L10P-201ENST00000436994 1285 ntBASIC11.42□□□□□ -0.58
SRRM4A7MD48 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 AL591846.1-201ENST00000451736 433 ntBASIC11.42□□□□□ -0.58
SRRM4A7MD48 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 AC007663.3-201ENST00000609632 465 ntBASIC11.42□□□□□ -0.58
SRRM4A7MD48 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 AC068587.8-201ENST00000641239 219 ntBASIC11.42□□□□□ -0.58
SRRM4A7MD48 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.42□□□□□ -0.58
SRRM4A7MD48 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SRRM4A7MD48 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 RPL13AP3-202ENST00000494676 1473 ntBASIC11.41□□□□□ -0.58
SRRM4A7MD48 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SRRM4A7MD48 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SRRM4A7MD48 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms