Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 POM121L10P-201ENST00000436994 1285 ntBASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 CICP12-201ENST00000455801 843 ntBASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 HNRNPA1P48-202ENST00000565308 961 ntBASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 MIR4741-201ENST00000579822 90 ntBASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 Six3os1_5.1-201ENST00000611000 271 ntBASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 AP000346.4-201ENST00000614827 381 ntBASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 KRT8P29-201ENST00000420409 1371 ntBASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC9.37□□□□□ -0.91
LINC00474Q9P2X8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 RPS3-201ENST00000278572 907 ntTSL 3 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 TISP43-201ENST00000409793 538 ntTSL 4 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 PTPA-218ENST00000435132 618 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AC244107.1-201ENST00000442033 332 ntBASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 IGHVIII-5-2-201ENST00000522505 261 ntBASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 MFF-223ENST00000524634 647 ntTSL 2 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 FAM8A2P-201ENST00000528813 1142 ntBASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC9.36□□□□□ -0.91
LINC00474Q9P2X8 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms