Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
PTPN18Q99952 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN18Q99952 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PTPN18Q99952 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN18Q99952 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 NRADDP-202ENST00000641269 1585 ntBASIC15.85■□□□□ 0.13
PTPN18Q99952 TPT1P9-201ENST00000413759 514 ntBASIC15.85■□□□□ 0.13
PTPN18Q99952 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN18Q99952 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN18Q99952 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC15.85■□□□□ 0.13
PTPN18Q99952 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN18Q99952 AC022447.5-201ENST00000504817 392 ntBASIC15.85■□□□□ 0.13
PTPN18Q99952 NDUFB2P1-201ENST00000506966 295 ntBASIC15.85■□□□□ 0.13
PTPN18Q99952 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC15.85■□□□□ 0.13
PTPN18Q99952 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC15.85■□□□□ 0.13
PTPN18Q99952 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
PTPN18Q99952 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
PTPN18Q99952 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC15.85■□□□□ 0.13
PTPN18Q99952 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN18Q99952 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC15.85■□□□□ 0.13
PTPN18Q99952 AC137723.2-201ENST00000623540 398 ntBASIC15.85■□□□□ 0.13
PTPN18Q99952 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN18Q99952 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN18Q99952 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN18Q99952 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 HSPA8P5-201ENST00000456928 2069 ntBASIC15.85■□□□□ 0.13
PTPN18Q99952 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC15.85■□□□□ 0.13
PTPN18Q99952 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
PTPN18Q99952 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PTPN18Q99952 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PTPN18Q99952 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PTPN18Q99952 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN18Q99952 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PTPN18Q99952 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
PTPN18Q99952 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
PTPN18Q99952 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
PTPN18Q99952 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PTPN18Q99952 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN18Q99952 SAP18P2-201ENST00000434334 459 ntBASIC15.84■□□□□ 0.13
PTPN18Q99952 POLR2LP1-206ENST00000444785 187 ntBASIC15.84■□□□□ 0.13
PTPN18Q99952 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN18Q99952 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN18Q99952 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 CDC37P2-201ENST00000562287 1029 ntBASIC15.84■□□□□ 0.13
PTPN18Q99952 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN18Q99952 PCTP-206ENST00000573500 919 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN18Q99952 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN18Q99952 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC15.84■□□□□ 0.13
PTPN18Q99952 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
PTPN18Q99952 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN18Q99952 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PTPN18Q99952 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN18Q99952 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.84■□□□□ 0.13
PTPN18Q99952 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 KRT8P25-201ENST00000473150 1456 ntBASIC15.84■□□□□ 0.13
PTPN18Q99952 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PTPN18Q99952 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN18Q99952 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN18Q99952 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.13
PTPN18Q99952 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN18Q99952 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
PTPN18Q99952 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.83■□□□□ 0.13
PTPN18Q99952 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN18Q99952 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
PTPN18Q99952 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN18Q99952 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN18Q99952 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN18Q99952 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN18Q99952 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PTPN18Q99952 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PTPN18Q99952 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN18Q99952 KRT8P6-201ENST00000399259 1207 ntBASIC15.83■□□□□ 0.12
PTPN18Q99952 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PTPN18Q99952 AL954722.1-201ENST00000431238 259 ntBASIC15.83■□□□□ 0.12
PTPN18Q99952 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms