Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AL136982.5-201ENST00000605222 294 ntBASIC15.27■□□□□ 0.04
LRCH3Q96II8 AL009176.1-201ENST00000607876 650 ntBASIC15.27■□□□□ 0.04
LRCH3Q96II8 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LRCH3Q96II8 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC15.27■□□□□ 0.04
LRCH3Q96II8 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC15.27■□□□□ 0.04
LRCH3Q96II8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH3Q96II8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH3Q96II8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH3Q96II8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LRCH3Q96II8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH3Q96II8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH3Q96II8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH3Q96II8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH3Q96II8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH3Q96II8 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.27■□□□□ 0.03
LRCH3Q96II8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH3Q96II8 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC15.27■□□□□ 0.03
LRCH3Q96II8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH3Q96II8 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.27■□□□□ 0.03
LRCH3Q96II8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LRCH3Q96II8 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 AC023090.2-201ENST00000625182 2110 ntBASIC15.26■□□□□ 0.03
LRCH3Q96II8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 AC067931.2-201ENST00000623655 2003 ntBASIC15.26■□□□□ 0.03
LRCH3Q96II8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 AP000533.1-201ENST00000456143 1177 ntBASIC15.26■□□□□ 0.03
LRCH3Q96II8 TPT1P11-201ENST00000458482 498 ntBASIC15.26■□□□□ 0.03
LRCH3Q96II8 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 RNF7-205ENST00000480908 782 ntTSL 4 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 AC100858.1-201ENST00000514059 1228 ntBASIC15.26■□□□□ 0.03
LRCH3Q96II8 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 HMGB1P8-201ENST00000558211 949 ntBASIC15.26■□□□□ 0.03
LRCH3Q96II8 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 BOLA3P2-201ENST00000586496 323 ntBASIC15.26■□□□□ 0.03
LRCH3Q96II8 EMP3-204ENST00000596315 761 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.26■□□□□ 0.03
LRCH3Q96II8 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 LINC00552-201ENST00000625151 2579 ntBASIC15.26■□□□□ 0.03
LRCH3Q96II8 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH3Q96II8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH3Q96II8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH3Q96II8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
LRCH3Q96II8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.25■□□□□ 0.03
LRCH3Q96II8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRCH3Q96II8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH3Q96II8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH3Q96II8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH3Q96II8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRCH3Q96II8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH3Q96II8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
LRCH3Q96II8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRCH3Q96II8 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH3Q96II8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH3Q96II8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH3Q96II8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH3Q96II8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
LRCH3Q96II8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH3Q96II8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH3Q96II8 FAM86FP-201ENST00000338711 969 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms