Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 TFAM-201ENST00000373895 973 ntTSL 2 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 AC012066.1-201ENST00000439252 694 ntBASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 AC012358.2-201ENST00000430010 1434 ntBASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 AC024475.2-201ENST00000312173 879 ntBASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 TPM3P7-201ENST00000338274 732 ntBASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 AC253536.1-201ENST00000437021 315 ntBASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
ALMS1Q8TCU4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 TEDDM2P-201ENST00000414169 786 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 RN7SL677P-201ENST00000466970 319 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 CXXC1P1-202ENST00000489409 1212 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 HIST1H2APS4-202ENST00000635537 681 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 AL139424.2-202ENST00000641335 1369 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 AC096713.1-201ENST00000514650 978 ntBASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 ROM1-205ENST00000534093 862 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
ALMS1Q8TCU4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms