Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 AC148477.5-201ENST00000625164 1645 ntBASIC8.39□□□□□ -1.07
SVIPQ8NHG7 EPS15P1-202ENST00000459691 2071 ntBASIC8.39□□□□□ -1.07
SVIPQ8NHG7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 MICU1-202ENST00000398761 2488 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 RTL10-203ENST00000407472 6523 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 YAF2-219ENST00000555248 5095 ntTSL 2 BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 SH3GLB1-201ENST00000370558 6371 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 GPD2-213ENST00000540309 1961 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 SCN5A-207ENST00000449557 5898 ntTSL 5 BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 GRIA1-203ENST00000448073 2825 ntTSL 2 BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 L3MBTL3-203ENST00000368139 4148 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 LGALS8-212ENST00000450372 6281 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 MAPK10-386ENST00000642038 2354 ntBASIC8.39□□□□□ -1.07
SVIPQ8NHG7 IKZF5-205ENST00000617859 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SVIPQ8NHG7 IQSEC2-201ENST00000375365 4004 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 AL157902.2-201ENST00000623435 1492 ntBASIC8.38□□□□□ -1.07
SVIPQ8NHG7 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 ARAP1-207ENST00000429686 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 GALK2-202ENST00000396509 1834 ntTSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 DDR1-227ENST00000376570 3820 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 METTL2B-201ENST00000262432 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 AL356583.1-201ENST00000398739 1371 ntBASIC8.38□□□□□ -1.07
SVIPQ8NHG7 WDR55-201ENST00000358337 4080 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 CORO1C-212ENST00000549772 1710 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 ELMSAN1-204ENST00000423556 3547 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 MYH2-202ENST00000397183 6078 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 WDR91-201ENST00000354475 4588 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 NME4-203ENST00000397722 1232 ntTSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 RN7SL488P-201ENST00000585186 286 ntBASIC8.38□□□□□ -1.07
SVIPQ8NHG7 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 CU633904.2-201ENST00000624595 879 ntBASIC8.38□□□□□ -1.07
SVIPQ8NHG7 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 EFTUD2-202ENST00000426333 4548 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 AC012354.1-201ENST00000425325 2685 ntTSL 3 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 KCTD7-211ENST00000640851 3745 ntTSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 RABGEF1-205ENST00000450873 2281 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 HK1-203ENST00000360289 3961 ntTSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 XRCC6-205ENST00000405878 2200 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 NAV2-201ENST00000349880 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 RBM22P2-201ENST00000393978 1814 ntBASIC8.38□□□□□ -1.07
SVIPQ8NHG7 AIFM1P1-201ENST00000413342 1841 ntBASIC8.38□□□□□ -1.07
SVIPQ8NHG7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 ETS2-202ENST00000360938 3766 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 SLC25A21-201ENST00000331299 2785 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 MASTL-202ENST00000375940 3080 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 ODF2-206ENST00000393533 2086 ntTSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 CES5A-203ENST00000518005 2092 ntTSL 2 BASIC8.38□□□□□ -1.07
SVIPQ8NHG7 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
SVIPQ8NHG7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SVIPQ8NHG7 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC8.37□□□□□ -1.07
SVIPQ8NHG7 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
SVIPQ8NHG7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms