RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 NISCHQ9Y2I1 1504 aa20.11■□□□□ 0.81
GPD2-213ENST00000540309 HRCP23327 699 aa17.37■□□□□ 0.37
GPD2-213ENST00000540309 ZCCHC6Q5VYS8 1495 aaKnown RBP17.14■□□□□ 0.33
GPD2-213ENST00000540309 CCDC180Q9P1Z9 1646 aa17.05■□□□□ 0.32
GPD2-213ENST00000540309 SHROOM4Q9ULL8 1493 aa17.03■□□□□ 0.32
GPD2-213ENST00000540309 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
GPD2-213ENST00000540309 DCAF1Q9Y4B6 1507 aa16.99■□□□□ 0.31
GPD2-213ENST00000540309 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
GPD2-213ENST00000540309 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
GPD2-213ENST00000540309 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
GPD2-213ENST00000540309 PCGF6Q9BYE7 350 aa16.81■□□□□ 0.28
GPD2-213ENST00000540309 ZEB1P37275 1124 aaPredicted RBP16.66■□□□□ 0.26
GPD2-213ENST00000540309 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
GPD2-213ENST00000540309 PPARGC1BQ86YN6 1023 aaKnown RBP16.58■□□□□ 0.24
GPD2-213ENST00000540309 MYT1Q01538 1121 aa16.37■□□□□ 0.21
GPD2-213ENST00000540309 LOC105371045A0A1W2PR82 267 aa16.29■□□□□ 0.2
GPD2-213ENST00000540309 ABCC9O60706 1549 aa16.27■□□□□ 0.19
GPD2-213ENST00000540309 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
GPD2-213ENST00000540309 RB1CC1Q8TDY2 1594 aa16.05■□□□□ 0.16
GPD2-213ENST00000540309 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
GPD2-213ENST00000540309 RSF1Q96T23 1441 aaPredicted RBP16.03■□□□□ 0.16
GPD2-213ENST00000540309 ACIN1Q9UKV3 1341 aaKnown RBP15.99■□□□□ 0.15
GPD2-213ENST00000540309 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
GPD2-213ENST00000540309 CENPBP07199 599 aaPredicted RBP15.91■□□□□ 0.14
GPD2-213ENST00000540309 NEUROD1Q13562 356 aa15.78■□□□□ 0.12
GPD2-213ENST00000540309 WRNQ14191 1432 aaPredicted RBP eCLIP15.77■□□□□ 0.11
GPD2-213ENST00000540309 DIEXFQ68CQ4 756 aaKnown RBP15.73■□□□□ 0.11
GPD2-213ENST00000540309 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
GPD2-213ENST00000540309 CCER1Q8TC90 406 aaPredicted RBP15.69■□□□□ 0.1
GPD2-213ENST00000540309 GTF3C3Q9Y5Q9 886 aa15.69■□□□□ 0.1
GPD2-213ENST00000540309 EIF4G1Q04637 1599 aaKnown RBP15.64■□□□□ 0.09
GPD2-213ENST00000540309 FAM9AQ8IZU1 332 aaPredicted RBP15.6■□□□□ 0.09
GPD2-213ENST00000540309 NACADO15069 1562 aa15.59■□□□□ 0.09
GPD2-213ENST00000540309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.59■□□□□ 0.09
GPD2-213ENST00000540309 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
GPD2-213ENST00000540309 CLSPNQ9HAW4 1339 aa15.56■□□□□ 0.08
GPD2-213ENST00000540309 ZNF316A6NFI3 1004 aaPredicted RBP15.55■□□□□ 0.08
GPD2-213ENST00000540309 EEA1Q15075 1411 aa15.54■□□□□ 0.08
GPD2-213ENST00000540309 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
GPD2-213ENST00000540309 TNIKQ9UKE5 1360 aa15.5■□□□□ 0.07
GPD2-213ENST00000540309 WIZO95785 1651 aa15.47■□□□□ 0.07
GPD2-213ENST00000540309 CECR2Q9BXF3 1484 aa15.46■□□□□ 0.07
GPD2-213ENST00000540309 CEP162Q5TB80 1403 aa15.45■□□□□ 0.06
GPD2-213ENST00000540309 TTBK1Q5TCY1 1321 aaPredicted RBP15.4■□□□□ 0.06
GPD2-213ENST00000540309 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
GPD2-213ENST00000540309 AEBP2Q6ZN18 517 aaPredicted RBP15.37■□□□□ 0.05
GPD2-213ENST00000540309 GOLGA3Q08378 1498 aa15.3■□□□□ 0.04
GPD2-213ENST00000540309 CCDC88BA6NC98 1476 aa15.28■□□□□ 0.04
GPD2-213ENST00000540309 SMARCA2P51531 1590 aa15.26■□□□□ 0.03
GPD2-213ENST00000540309 CSRNP3Q8WYN3 585 aa15.24■□□□□ 0.03
GPD2-213ENST00000540309 KIF21BO75037 1637 aa15.24■□□□□ 0.03
GPD2-213ENST00000540309 MIER1Q8N108 512 aa15.24■□□□□ 0.03
GPD2-213ENST00000540309 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
GPD2-213ENST00000540309 ABCC8Q09428 1581 aa15.21■□□□□ 0.03
GPD2-213ENST00000540309 SMARCA4P51532 1647 aa15.21■□□□□ 0.02
GPD2-213ENST00000540309 BAZ1BQ9UIG0 1483 aaKnown RBP15.19■□□□□ 0.02
GPD2-213ENST00000540309 CEP164Q9UPV0 1460 aa15.19■□□□□ 0.02
GPD2-213ENST00000540309 SOGA1O94964 1423 aa15.19■□□□□ 0.02
GPD2-213ENST00000540309 VPS8Q8N3P4 1428 aa15.14■□□□□ 0.01
GPD2-213ENST00000540309 YTHDC1Q96MU7 727 aaKnown RBP15.12■□□□□ 0.01
GPD2-213ENST00000540309 UBTFP17480 764 aaKnown RBP15.09■□□□□ 0.01
GPD2-213ENST00000540309 SUPT16HQ9Y5B9 1047 aaKnown RBP15.07■□□□□ 0
GPD2-213ENST00000540309 CLIP1P30622 1438 aa15.06■□□□□ 0
GPD2-213ENST00000540309 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
GPD2-213ENST00000540309 RUSC2Q8N2Y8 1516 aa15.04■□□□□ -0
GPD2-213ENST00000540309 ANP32EQ9BTT0 268 aa15.04■□□□□ -0
GPD2-213ENST00000540309 CUX2O14529 1486 aa15.01□□□□□ -0.01
GPD2-213ENST00000540309 APLP2Q06481 763 aa14.98□□□□□ -0.01
GPD2-213ENST00000540309 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
GPD2-213ENST00000540309 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
GPD2-213ENST00000540309 HNRNPUL2Q1KMD3 747 aaKnown RBP14.96□□□□□ -0.01
GPD2-213ENST00000540309 TSHZ2Q9NRE2 1034 aa14.95□□□□□ -0.02
GPD2-213ENST00000540309 ERICH3Q5RHP9 1530 aa14.94□□□□□ -0.02
GPD2-213ENST00000540309 SYNJ1O43426 1573 aa14.92□□□□□ -0.02
GPD2-213ENST00000540309 RRBP1Q9P2E9 1410 aaKnown RBP14.91□□□□□ -0.02
GPD2-213ENST00000540309 UNC13AQ9UPW8 1703 aa14.9□□□□□ -0.02
GPD2-213ENST00000540309 RAPGEF2Q9Y4G8 1499 aa14.84□□□□□ -0.03
GPD2-213ENST00000540309 TOP2BQ02880 1626 aa14.83□□□□□ -0.04
GPD2-213ENST00000540309 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
GPD2-213ENST00000540309 PRXQ9BXM0 1461 aa14.79□□□□□ -0.04
GPD2-213ENST00000540309 TIMELESSQ9UNS1 1208 aa14.79□□□□□ -0.04
GPD2-213ENST00000540309 MAP3K1Q13233 1512 aa14.78□□□□□ -0.04
GPD2-213ENST00000540309 BCL11AQ9H165 835 aa14.78□□□□□ -0.04
GPD2-213ENST00000540309 ARAP1Q96P48 1450 aa14.77□□□□□ -0.05
GPD2-213ENST00000540309 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
GPD2-213ENST00000540309 CCER2I3L3R5 266 aa14.72□□□□□ -0.05
GPD2-213ENST00000540309 MAPKBP1O60336 1514 aa14.68□□□□□ -0.06
GPD2-213ENST00000540309 MYT1LQ9UL68 1186 aa14.67□□□□□ -0.06
GPD2-213ENST00000540309 NEFLP07196 543 aa14.66□□□□□ -0.06
GPD2-213ENST00000540309 BICRAQ9NZM4 1560 aa14.66□□□□□ -0.06
GPD2-213ENST00000540309 ATAD2BQ9ULI0 1458 aa14.65□□□□□ -0.06
GPD2-213ENST00000540309 RBM19Q9Y4C8 960 aaKnown RBP14.64□□□□□ -0.07
GPD2-213ENST00000540309 FANCIQ9NVI1 1328 aa14.62□□□□□ -0.07
GPD2-213ENST00000540309 ERICH6BQ5W0A0 696 aa14.62□□□□□ -0.07
GPD2-213ENST00000540309 FKBP8Q14318 412 aa14.6□□□□□ -0.07
GPD2-213ENST00000540309 KANK4Q5T7N3 995 aaPredicted RBP14.6□□□□□ -0.07
GPD2-213ENST00000540309 SETD5Q9C0A6 1442 aa14.6□□□□□ -0.07
GPD2-213ENST00000540309 RAB3GAP2Q9H2M9 1393 aa14.59□□□□□ -0.07
GPD2-213ENST00000540309 PPP1R15AO75807 674 aaPredicted RBP14.59□□□□□ -0.07
GPD2-213ENST00000540309 KIF27Q86VH2 1401 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms