Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 ACTBP7-201ENST00000418351 1124 ntBASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 AL139424.3-202ENST00000641619 917 ntBASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NPAS4Q8IUM7 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 SIRPB3P-201ENST00000340424 1216 ntBASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 U3.5-201ENST00000363448 216 ntBASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 AC092570.1-201ENST00000414446 469 ntBASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 GOLGA6L16P-201ENST00000441780 1299 ntBASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 TBC1D3P6-201ENST00000505954 962 ntBASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 AC139713.2-207ENST00000641556 1292 ntBASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NPAS4Q8IUM7 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 AC020910.6-201ENST00000623084 1459 ntBASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 MIR600HG-201ENST00000449175 5984 ntBASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NPAS4Q8IUM7 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms