Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VARS2Q5ST30 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.06■□□□□ 0
VARS2Q5ST30 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.06■□□□□ 0
VARS2Q5ST30 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.06■□□□□ 0
VARS2Q5ST30 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VARS2Q5ST30 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.06■□□□□ 0
VARS2Q5ST30 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 USP17L6P-201ENST00000382470 1197 ntBASIC15.06■□□□□ 0
VARS2Q5ST30 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.06■□□□□ 0
VARS2Q5ST30 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.06■□□□□ 0
VARS2Q5ST30 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC15.06■□□□□ 0
VARS2Q5ST30 LINC00265-2P-201ENST00000413372 782 ntBASIC15.06■□□□□ 0
VARS2Q5ST30 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.06■□□□□ 0
VARS2Q5ST30 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.06■□□□□ 0
VARS2Q5ST30 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.06■□□□□ 0
VARS2Q5ST30 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 NAA40-205ENST00000539656 577 ntTSL 4 BASIC15.06■□□□□ 0
VARS2Q5ST30 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC15.06■□□□□ 0
VARS2Q5ST30 MEG8-217ENST00000556637 924 ntTSL 5 BASIC15.06■□□□□ 0
VARS2Q5ST30 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 AC145285.5-201ENST00000562217 361 ntBASIC15.06■□□□□ 0
VARS2Q5ST30 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC15.06■□□□□ 0
VARS2Q5ST30 RN7SL455P-201ENST00000580629 282 ntBASIC15.06■□□□□ 0
VARS2Q5ST30 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.06■□□□□ 0
VARS2Q5ST30 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.06■□□□□ 0
VARS2Q5ST30 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 AC105137.3-201ENST00000617588 984 ntBASIC15.06■□□□□ 0
VARS2Q5ST30 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
VARS2Q5ST30 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
VARS2Q5ST30 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.06■□□□□ 0
VARS2Q5ST30 AC023908.3-201ENST00000564211 3047 ntBASIC15.06■□□□□ 0
VARS2Q5ST30 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.06■□□□□ 0
VARS2Q5ST30 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.06■□□□□ 0
VARS2Q5ST30 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.06■□□□□ 0
VARS2Q5ST30 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
VARS2Q5ST30 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.06■□□□□ 0
VARS2Q5ST30 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
VARS2Q5ST30 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
VARS2Q5ST30 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.05■□□□□ 0
VARS2Q5ST30 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.05■□□□□ 0
VARS2Q5ST30 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VARS2Q5ST30 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VARS2Q5ST30 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VARS2Q5ST30 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.05■□□□□ 0
VARS2Q5ST30 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VARS2Q5ST30 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.05■□□□□ -0
VARS2Q5ST30 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VARS2Q5ST30 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
VARS2Q5ST30 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC15.05■□□□□ -0
VARS2Q5ST30 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC15.05■□□□□ -0
VARS2Q5ST30 AC004837.1-201ENST00000446267 564 ntBASIC15.05■□□□□ -0
VARS2Q5ST30 AC022395.1-201ENST00000451610 895 ntTSL 2 BASIC15.05■□□□□ -0
VARS2Q5ST30 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC15.05■□□□□ -0
VARS2Q5ST30 RN7SL788P-201ENST00000460504 316 ntBASIC15.05■□□□□ -0
VARS2Q5ST30 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.05■□□□□ -0
VARS2Q5ST30 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 GOLGA2P8-201ENST00000505201 779 ntBASIC15.05■□□□□ -0
VARS2Q5ST30 SLC25A15P3-201ENST00000505530 290 ntBASIC15.05■□□□□ -0
VARS2Q5ST30 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
VARS2Q5ST30 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.05■□□□□ -0
VARS2Q5ST30 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC15.05■□□□□ -0
VARS2Q5ST30 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.05■□□□□ -0
VARS2Q5ST30 AC068867.1-201ENST00000559855 150 ntBASIC15.05■□□□□ -0
VARS2Q5ST30 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.05■□□□□ -0
VARS2Q5ST30 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.05■□□□□ -0
VARS2Q5ST30 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC15.05■□□□□ -0
VARS2Q5ST30 DBP-202ENST00000593500 712 ntTSL 2 BASIC15.05■□□□□ -0
VARS2Q5ST30 AC140113.1-201ENST00000603467 169 ntBASIC15.05■□□□□ -0
VARS2Q5ST30 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC15.05■□□□□ -0
VARS2Q5ST30 CASP16P-204ENST00000635032 809 ntBASIC15.05■□□□□ -0
VARS2Q5ST30 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.05■□□□□ -0
VARS2Q5ST30 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VARS2Q5ST30 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 KRT8P18-201ENST00000413425 1445 ntBASIC15.05■□□□□ -0
VARS2Q5ST30 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.05■□□□□ -0
VARS2Q5ST30 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
VARS2Q5ST30 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VARS2Q5ST30 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms