Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC12.64□□□□□ -0.39
GFRA1P56159 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 AC135983.4-201ENST00000564116 1262 ntBASIC12.64□□□□□ -0.39
GFRA1P56159 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 AC132825.4-202ENST00000578792 434 ntBASIC12.64□□□□□ -0.39
GFRA1P56159 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.64□□□□□ -0.39
GFRA1P56159 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 AC005618.3-201ENST00000624928 458 ntBASIC12.64□□□□□ -0.39
GFRA1P56159 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GFRA1P56159 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.64□□□□□ -0.39
GFRA1P56159 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GFRA1P56159 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.64□□□□□ -0.39
GFRA1P56159 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GFRA1P56159 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
GFRA1P56159 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 AC019109.1-201ENST00000401725 1874 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.63□□□□□ -0.39
GFRA1P56159 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GFRA1P56159 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
GFRA1P56159 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.63□□□□□ -0.39
GFRA1P56159 HIST2H2BA-201ENST00000412169 381 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 RPSAP31-201ENST00000416648 895 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.63□□□□□ -0.39
GFRA1P56159 AK2P2-201ENST00000439142 405 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 GRPEL2P1-201ENST00000453145 339 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GFRA1P56159 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.63□□□□□ -0.39
GFRA1P56159 TMCO5B-205ENST00000530020 894 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 IQSEC3P1-201ENST00000538799 536 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 NPM1P43-201ENST00000558669 786 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.63□□□□□ -0.39
GFRA1P56159 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 NUDT4P2-201ENST00000578341 546 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 AP005264.5-201ENST00000590066 467 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 AC007250.1-201ENST00000608934 338 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 AC011491.1-203ENST00000637688 543 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GFRA1P56159 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.63□□□□□ -0.39
GFRA1P56159 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
GFRA1P56159 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.63□□□□□ -0.39
GFRA1P56159 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 LINC01230-201ENST00000625222 3017 ntBASIC12.63□□□□□ -0.39
GFRA1P56159 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.63□□□□□ -0.39
GFRA1P56159 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
GFRA1P56159 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
GFRA1P56159 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GFRA1P56159 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms