Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.52■□□□□ 0.07
CPT1AP50416 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPT1AP50416 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPT1AP50416 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPT1AP50416 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CPT1AP50416 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CPT1AP50416 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPT1AP50416 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.52■□□□□ 0.07
CPT1AP50416 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.52■□□□□ 0.07
CPT1AP50416 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPT1AP50416 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CPT1AP50416 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CPT1AP50416 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC15.51■□□□□ 0.07
CPT1AP50416 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.51■□□□□ 0.07
CPT1AP50416 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CPT1AP50416 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
CPT1AP50416 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC15.51■□□□□ 0.07
CPT1AP50416 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
CPT1AP50416 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CPT1AP50416 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 AC005722.1-201ENST00000431878 964 ntBASIC15.51■□□□□ 0.07
CPT1AP50416 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.51■□□□□ 0.07
CPT1AP50416 GULOP-201ENST00000454030 748 ntBASIC15.51■□□□□ 0.07
CPT1AP50416 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.51■□□□□ 0.07
CPT1AP50416 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.51■□□□□ 0.07
CPT1AP50416 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CPT1AP50416 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.51■□□□□ 0.07
CPT1AP50416 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC15.51■□□□□ 0.07
CPT1AP50416 MIR4326-201ENST00000582203 59 ntBASIC15.51■□□□□ 0.07
CPT1AP50416 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.51■□□□□ 0.07
CPT1AP50416 AP001527.2-201ENST00000614441 631 ntBASIC15.51■□□□□ 0.07
CPT1AP50416 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC15.51■□□□□ 0.07
CPT1AP50416 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.51■□□□□ 0.07
CPT1AP50416 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.51■□□□□ 0.07
CPT1AP50416 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CPT1AP50416 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
CPT1AP50416 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.51■□□□□ 0.07
CPT1AP50416 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CPT1AP50416 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.5■□□□□ 0.07
CPT1AP50416 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.5■□□□□ 0.07
CPT1AP50416 AC012617.1-204ENST00000586340 2305 ntBASIC15.5■□□□□ 0.07
CPT1AP50416 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.5■□□□□ 0.07
CPT1AP50416 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.5■□□□□ 0.07
CPT1AP50416 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
CPT1AP50416 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.5■□□□□ 0.07
CPT1AP50416 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.5■□□□□ 0.07
CPT1AP50416 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC15.5■□□□□ 0.07
CPT1AP50416 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC15.5■□□□□ 0.07
CPT1AP50416 AL929302.1-201ENST00000426556 871 ntBASIC15.5■□□□□ 0.07
CPT1AP50416 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CPT1AP50416 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC15.5■□□□□ 0.07
CPT1AP50416 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.5■□□□□ 0.07
CPT1AP50416 RPL3P5-201ENST00000441645 1232 ntBASIC15.5■□□□□ 0.07
CPT1AP50416 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 KNOP1P1-201ENST00000542108 989 ntBASIC15.5■□□□□ 0.07
CPT1AP50416 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 CSTP2-201ENST00000610599 398 ntBASIC15.5■□□□□ 0.07
CPT1AP50416 MIR8071-1-201ENST00000616769 65 ntBASIC15.5■□□□□ 0.07
CPT1AP50416 MIR8071-2-201ENST00000616772 65 ntBASIC15.5■□□□□ 0.07
CPT1AP50416 AC005274.1-201ENST00000623460 802 ntBASIC15.5■□□□□ 0.07
CPT1AP50416 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CPT1AP50416 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.5■□□□□ 0.07
CPT1AP50416 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
CPT1AP50416 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC15.5■□□□□ 0.07
CPT1AP50416 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CPT1AP50416 AC144831.1-201ENST00000573312 2656 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms