Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.99□□□□□ -0.33
CENPAP49450 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CENPAP49450 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
CENPAP49450 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
CENPAP49450 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CENPAP49450 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.99□□□□□ -0.33
CENPAP49450 AL157996.1-201ENST00000624684 2299 ntBASIC12.99□□□□□ -0.33
CENPAP49450 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 KRT8P28-201ENST00000433288 1390 ntBASIC12.98□□□□□ -0.33
CENPAP49450 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.98□□□□□ -0.33
CENPAP49450 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
CENPAP49450 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
CENPAP49450 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.98□□□□□ -0.33
CENPAP49450 AC112492.5-201ENST00000421897 457 ntBASIC12.98□□□□□ -0.33
CENPAP49450 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.98□□□□□ -0.33
CENPAP49450 HMGN1P19-201ENST00000436976 333 ntBASIC12.98□□□□□ -0.33
CENPAP49450 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.98□□□□□ -0.33
CENPAP49450 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.98□□□□□ -0.33
CENPAP49450 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.98□□□□□ -0.33
CENPAP49450 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.98□□□□□ -0.33
CENPAP49450 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.98□□□□□ -0.33
CENPAP49450 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CENPAP49450 AC027601.3-201ENST00000622907 509 ntBASIC12.98□□□□□ -0.33
CENPAP49450 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CENPAP49450 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.98□□□□□ -0.33
CENPAP49450 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CENPAP49450 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CENPAP49450 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CENPAP49450 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.97□□□□□ -0.33
CENPAP49450 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CENPAP49450 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms