Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 SNORA30.1-201ENST00000363193 129 ntBASIC15.65■□□□□ 0.1
TM4SF4P48230 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TM4SF4P48230 SERF2-204ENST00000402131 586 ntTSL 2 BASIC15.65■□□□□ 0.1
TM4SF4P48230 RPSAP61-201ENST00000412542 878 ntBASIC15.65■□□□□ 0.1
TM4SF4P48230 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC15.65■□□□□ 0.1
TM4SF4P48230 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC15.65■□□□□ 0.1
TM4SF4P48230 RN7SL638P-201ENST00000494527 290 ntBASIC15.65■□□□□ 0.1
TM4SF4P48230 AP001102.1-201ENST00000528959 409 ntBASIC15.65■□□□□ 0.1
TM4SF4P48230 AL139317.2-201ENST00000556998 158 ntBASIC15.65■□□□□ 0.1
TM4SF4P48230 LINC02352-201ENST00000557928 468 ntTSL 5 BASIC15.65■□□□□ 0.1
TM4SF4P48230 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TM4SF4P48230 AC063977.2-201ENST00000601996 421 ntBASIC15.65■□□□□ 0.1
TM4SF4P48230 AL078624.1-201ENST00000604004 547 ntBASIC15.65■□□□□ 0.1
TM4SF4P48230 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 AC127002.1-201ENST00000619123 455 ntBASIC15.65■□□□□ 0.1
TM4SF4P48230 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TM4SF4P48230 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 TUBA3GP-201ENST00000410028 1325 ntBASIC15.65■□□□□ 0.1
TM4SF4P48230 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 RCC2P1-201ENST00000452257 1476 ntBASIC15.65■□□□□ 0.1
TM4SF4P48230 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TM4SF4P48230 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TM4SF4P48230 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TM4SF4P48230 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.64■□□□□ 0.09
TM4SF4P48230 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.64■□□□□ 0.09
TM4SF4P48230 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.64■□□□□ 0.09
TM4SF4P48230 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC15.64■□□□□ 0.09
TM4SF4P48230 AC093462.1-201ENST00000621167 1683 ntBASIC15.64■□□□□ 0.09
TM4SF4P48230 AC040160.2-201ENST00000623816 1675 ntBASIC15.64■□□□□ 0.09
TM4SF4P48230 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TM4SF4P48230 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.64■□□□□ 0.09
TM4SF4P48230 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 RNA5SP84-201ENST00000364740 107 ntBASIC15.64■□□□□ 0.09
TM4SF4P48230 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 AL121994.1-201ENST00000413189 402 ntBASIC15.64■□□□□ 0.09
TM4SF4P48230 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC15.64■□□□□ 0.09
TM4SF4P48230 AC007881.1-201ENST00000437460 187 ntBASIC15.64■□□□□ 0.09
TM4SF4P48230 AL137077.1-201ENST00000442115 528 ntBASIC15.64■□□□□ 0.09
TM4SF4P48230 RN7SL479P-201ENST00000472003 300 ntBASIC15.64■□□□□ 0.09
TM4SF4P48230 AC010395.2-201ENST00000509899 904 ntBASIC15.64■□□□□ 0.09
TM4SF4P48230 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TM4SF4P48230 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC15.64■□□□□ 0.09
TM4SF4P48230 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TM4SF4P48230 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC15.64■□□□□ 0.09
TM4SF4P48230 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC15.64■□□□□ 0.09
TM4SF4P48230 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC15.64■□□□□ 0.09
TM4SF4P48230 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 AC211476.2-201ENST00000608799 708 ntBASIC15.64■□□□□ 0.09
TM4SF4P48230 MIR6165-201ENST00000614803 84 ntBASIC15.64■□□□□ 0.09
TM4SF4P48230 AC117500.5-201ENST00000623233 527 ntBASIC15.64■□□□□ 0.09
TM4SF4P48230 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TM4SF4P48230 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TM4SF4P48230 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TM4SF4P48230 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TM4SF4P48230 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TM4SF4P48230 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TM4SF4P48230 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TM4SF4P48230 AC006486.2-201ENST00000624246 2199 ntBASIC15.63■□□□□ 0.09
TM4SF4P48230 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TM4SF4P48230 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TM4SF4P48230 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.63■□□□□ 0.09
TM4SF4P48230 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM4SF4P48230 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM4SF4P48230 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TM4SF4P48230 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM4SF4P48230 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TM4SF4P48230 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC15.63■□□□□ 0.09
TM4SF4P48230 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM4SF4P48230 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TM4SF4P48230 FAM86FP-201ENST00000338711 969 ntBASIC15.63■□□□□ 0.09
TM4SF4P48230 SERPINB8P1-201ENST00000401898 377 ntBASIC15.63■□□□□ 0.09
TM4SF4P48230 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC15.63■□□□□ 0.09
TM4SF4P48230 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TM4SF4P48230 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TM4SF4P48230 RPL10P8-201ENST00000522888 313 ntBASIC15.63■□□□□ 0.09
TM4SF4P48230 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC15.63■□□□□ 0.09
TM4SF4P48230 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms