Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CBX5P45973 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.32□□□□□ -0.44
CBX5P45973 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CBX5P45973 AL442647.2-201ENST00000429864 857 ntBASIC12.32□□□□□ -0.44
CBX5P45973 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.32□□□□□ -0.44
CBX5P45973 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.32□□□□□ -0.44
CBX5P45973 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.32□□□□□ -0.44
CBX5P45973 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.32□□□□□ -0.44
CBX5P45973 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.32□□□□□ -0.44
CBX5P45973 AC009407.1-201ENST00000568958 598 ntBASIC12.32□□□□□ -0.44
CBX5P45973 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.32□□□□□ -0.44
CBX5P45973 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CBX5P45973 AC104506.1-201ENST00000609247 429 ntBASIC12.32□□□□□ -0.44
CBX5P45973 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CBX5P45973 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CBX5P45973 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CBX5P45973 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CBX5P45973 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC12.32□□□□□ -0.44
CBX5P45973 PCDHB19P-202ENST00000625133 2914 ntBASIC12.32□□□□□ -0.44
CBX5P45973 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CBX5P45973 AL445209.1-201ENST00000607269 3491 ntBASIC12.32□□□□□ -0.44
CBX5P45973 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CBX5P45973 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CBX5P45973 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CBX5P45973 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CBX5P45973 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.31□□□□□ -0.44
CBX5P45973 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.31□□□□□ -0.44
CBX5P45973 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CBX5P45973 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.31□□□□□ -0.44
CBX5P45973 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 PUDPP3-201ENST00000445368 636 ntBASIC12.31□□□□□ -0.44
CBX5P45973 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.31□□□□□ -0.44
CBX5P45973 SPDYE18-201ENST00000510091 1050 ntBASIC12.31□□□□□ -0.44
CBX5P45973 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.31□□□□□ -0.44
CBX5P45973 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.31□□□□□ -0.44
CBX5P45973 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
CBX5P45973 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.31□□□□□ -0.44
CBX5P45973 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 AC004840.1-201ENST00000636359 365 ntBASIC12.31□□□□□ -0.44
CBX5P45973 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 MKRN5P-201ENST00000445263 1467 ntBASIC12.31□□□□□ -0.44
CBX5P45973 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.31□□□□□ -0.44
CBX5P45973 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 AL022323.5-201ENST00000624101 2059 ntBASIC12.31□□□□□ -0.44
CBX5P45973 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CBX5P45973 MARK2P9-201ENST00000430958 1727 ntBASIC12.31□□□□□ -0.44
CBX5P45973 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
CBX5P45973 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CBX5P45973 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CBX5P45973 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CBX5P45973 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CBX5P45973 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CBX5P45973 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CBX5P45973 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CBX5P45973 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC12.3□□□□□ -0.44
CBX5P45973 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CBX5P45973 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CBX5P45973 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CBX5P45973 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CBX5P45973 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
CBX5P45973 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CBX5P45973 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.3□□□□□ -0.44
CBX5P45973 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CBX5P45973 AC024075.2-201ENST00000598112 1473 ntBASIC12.3□□□□□ -0.44
CBX5P45973 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms