Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
USP6P35125 EEF1DP5-201ENST00000431410 772 ntBASIC18.61■□□□□ 0.57
USP6P35125 HNRNPA3P12-201ENST00000437410 1063 ntBASIC18.61■□□□□ 0.57
USP6P35125 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC18.61■□□□□ 0.57
USP6P35125 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 AP000920.1-201ENST00000531824 344 ntBASIC18.61■□□□□ 0.57
USP6P35125 SRP14-208ENST00000560773 468 ntTSL 3 BASIC18.61■□□□□ 0.57
USP6P35125 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 AC011462.4-201ENST00000616866 449 ntBASIC18.61■□□□□ 0.57
USP6P35125 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
USP6P35125 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC18.61■□□□□ 0.57
USP6P35125 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.61■□□□□ 0.57
USP6P35125 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
USP6P35125 AC020763.3-201ENST00000625095 2904 ntBASIC18.6■□□□□ 0.57
USP6P35125 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
USP6P35125 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.6■□□□□ 0.57
USP6P35125 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC18.6■□□□□ 0.57
USP6P35125 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC18.6■□□□□ 0.57
USP6P35125 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC18.6■□□□□ 0.57
USP6P35125 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
USP6P35125 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC18.6■□□□□ 0.57
USP6P35125 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC18.6■□□□□ 0.57
USP6P35125 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC18.6■□□□□ 0.57
USP6P35125 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC18.6■□□□□ 0.57
USP6P35125 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC18.6■□□□□ 0.57
USP6P35125 PHBP18-201ENST00000546648 813 ntBASIC18.6■□□□□ 0.57
USP6P35125 EMC4-208ENST00000559078 599 ntTSL 3 BASIC18.6■□□□□ 0.57
USP6P35125 NAA38-204ENST00000575208 529 ntTSL 3 BASIC18.6■□□□□ 0.57
USP6P35125 MIR4254-201ENST00000581063 76 ntBASIC18.6■□□□□ 0.57
USP6P35125 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC18.6■□□□□ 0.57
USP6P35125 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC18.6■□□□□ 0.57
USP6P35125 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC18.6■□□□□ 0.57
USP6P35125 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC18.6■□□□□ 0.57
USP6P35125 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
USP6P35125 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC18.6■□□□□ 0.57
USP6P35125 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC18.6■□□□□ 0.57
USP6P35125 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
USP6P35125 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
USP6P35125 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
USP6P35125 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP6P35125 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC18.59■□□□□ 0.57
USP6P35125 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6P35125 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
USP6P35125 AIG1-203ENST00000367596 559 ntTSL 2 BASIC18.59■□□□□ 0.57
USP6P35125 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC18.59■□□□□ 0.57
USP6P35125 MIR632-201ENST00000385193 94 ntBASIC18.59■□□□□ 0.57
USP6P35125 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
USP6P35125 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC18.59■□□□□ 0.57
USP6P35125 AL137244.1-201ENST00000422931 865 ntBASIC18.59■□□□□ 0.57
USP6P35125 KRT8P30-201ENST00000432100 650 ntBASIC18.59■□□□□ 0.57
USP6P35125 RPL29P2-201ENST00000488409 460 ntBASIC18.59■□□□□ 0.57
USP6P35125 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC18.59■□□□□ 0.57
USP6P35125 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC18.59■□□□□ 0.57
USP6P35125 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC18.59■□□□□ 0.57
USP6P35125 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC18.59■□□□□ 0.57
USP6P35125 MIR5091-201ENST00000578707 93 ntBASIC18.59■□□□□ 0.57
USP6P35125 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
USP6P35125 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6P35125 AC005912.2-201ENST00000619492 2400 ntBASIC18.59■□□□□ 0.57
USP6P35125 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6P35125 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP6P35125 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC18.59■□□□□ 0.57
USP6P35125 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC18.59■□□□□ 0.57
USP6P35125 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
USP6P35125 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
USP6P35125 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6P35125 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
USP6P35125 ERG-211ENST00000453032 1595 ntTSL 2 BASIC18.59■□□□□ 0.57
USP6P35125 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
USP6P35125 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC18.58■□□□□ 0.57
USP6P35125 AC004522.1-201ENST00000419978 654 ntBASIC18.58■□□□□ 0.57
USP6P35125 PSME2P2-201ENST00000453033 700 ntBASIC18.58■□□□□ 0.57
USP6P35125 HIST1H2APS2-201ENST00000454426 370 ntBASIC18.58■□□□□ 0.57
USP6P35125 RPSAP70-201ENST00000504462 864 ntBASIC18.58■□□□□ 0.57
USP6P35125 SAA2-206ENST00000530400 323 ntTSL 3 BASIC18.58■□□□□ 0.57
USP6P35125 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC18.58■□□□□ 0.57
USP6P35125 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
USP6P35125 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
USP6P35125 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
USP6P35125 AC011477.7-201ENST00000617163 1440 ntBASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms