Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ITGA6P23229 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.26■□□□□ 0.35
ITGA6P23229 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ITGA6P23229 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ITGA6P23229 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ITGA6P23229 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
ITGA6P23229 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
ITGA6P23229 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ITGA6P23229 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.26■□□□□ 0.35
ITGA6P23229 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ITGA6P23229 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.25■□□□□ 0.35
ITGA6P23229 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.25■□□□□ 0.35
ITGA6P23229 AL928654.5-201ENST00000624831 2501 ntBASIC17.25■□□□□ 0.35
ITGA6P23229 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ITGA6P23229 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA6P23229 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ITGA6P23229 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ITGA6P23229 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ITGA6P23229 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.25■□□□□ 0.35
ITGA6P23229 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 SSR4-202ENST00000370085 526 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA6P23229 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA6P23229 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC17.25■□□□□ 0.35
ITGA6P23229 AQP7P5-201ENST00000428759 1049 ntBASIC17.25■□□□□ 0.35
ITGA6P23229 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA6P23229 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA6P23229 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC17.25■□□□□ 0.35
ITGA6P23229 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC17.25■□□□□ 0.35
ITGA6P23229 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.25■□□□□ 0.35
ITGA6P23229 AQP7P4-201ENST00000447083 1042 ntBASIC17.25■□□□□ 0.35
ITGA6P23229 AQP7P2-201ENST00000453967 1041 ntBASIC17.25■□□□□ 0.35
ITGA6P23229 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.25■□□□□ 0.35
ITGA6P23229 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA6P23229 PTK2-225ENST00000520892 571 ntTSL 4 BASIC17.25■□□□□ 0.35
ITGA6P23229 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 MT2A-202ENST00000561491 581 ntTSL 2 BASIC17.25■□□□□ 0.35
ITGA6P23229 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 AC073592.2-201ENST00000623062 780 ntBASIC17.25■□□□□ 0.35
ITGA6P23229 AQP7P3-201ENST00000624547 1041 ntBASIC17.25■□□□□ 0.35
ITGA6P23229 GARS-210ENST00000627489 324 ntTSL 4 BASIC17.25■□□□□ 0.35
ITGA6P23229 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.25■□□□□ 0.35
ITGA6P23229 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC17.25■□□□□ 0.35
ITGA6P23229 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
ITGA6P23229 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ITGA6P23229 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
ITGA6P23229 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ITGA6P23229 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA6P23229 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.24■□□□□ 0.35
ITGA6P23229 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA6P23229 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA6P23229 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA6P23229 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.24■□□□□ 0.35
ITGA6P23229 AC093462.1-201ENST00000621167 1683 ntBASIC17.24■□□□□ 0.35
ITGA6P23229 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ITGA6P23229 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.24■□□□□ 0.35
ITGA6P23229 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC17.24■□□□□ 0.35
ITGA6P23229 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.24■□□□□ 0.35
ITGA6P23229 KRT18P37-201ENST00000520711 1282 ntBASIC17.24■□□□□ 0.35
ITGA6P23229 FOXN3-AS2-201ENST00000554071 1262 ntBASIC17.24■□□□□ 0.35
ITGA6P23229 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC17.24■□□□□ 0.35
ITGA6P23229 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
ITGA6P23229 AL139424.3-202ENST00000641619 917 ntBASIC17.24■□□□□ 0.35
ITGA6P23229 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.24■□□□□ 0.35
ITGA6P23229 AC002472.4-201ENST00000641915 272 ntBASIC17.24■□□□□ 0.35
ITGA6P23229 GOLGA8VP-201ENST00000559009 1798 ntBASIC17.24■□□□□ 0.35
ITGA6P23229 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.24■□□□□ 0.35
ITGA6P23229 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA6P23229 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA6P23229 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA6P23229 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.24■□□□□ 0.35
ITGA6P23229 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ITGA6P23229 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ITGA6P23229 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.24■□□□□ 0.35
ITGA6P23229 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.24■□□□□ 0.35
ITGA6P23229 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms