Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 MARK2P16-201ENST00000605714 1723 ntBASIC14.35□□□□□ -0.11
XPAP23025 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
XPAP23025 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
XPAP23025 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.35□□□□□ -0.11
XPAP23025 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.35□□□□□ -0.11
XPAP23025 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.34□□□□□ -0.11
XPAP23025 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC14.34□□□□□ -0.11
XPAP23025 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.34□□□□□ -0.11
XPAP23025 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.34□□□□□ -0.11
XPAP23025 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 KRT8P19-201ENST00000551916 1455 ntBASIC14.34□□□□□ -0.11
XPAP23025 AC020910.6-201ENST00000623084 1459 ntBASIC14.34□□□□□ -0.11
XPAP23025 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
XPAP23025 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 AC006987.1-201ENST00000413610 527 ntBASIC14.34□□□□□ -0.11
XPAP23025 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.34□□□□□ -0.11
XPAP23025 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.34□□□□□ -0.11
XPAP23025 DUTP3-201ENST00000450025 415 ntBASIC14.34□□□□□ -0.11
XPAP23025 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
XPAP23025 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
XPAP23025 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.34□□□□□ -0.11
XPAP23025 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC14.34□□□□□ -0.11
XPAP23025 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.34□□□□□ -0.11
XPAP23025 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.34□□□□□ -0.11
XPAP23025 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.34□□□□□ -0.11
XPAP23025 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
XPAP23025 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
XPAP23025 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.34□□□□□ -0.11
XPAP23025 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
XPAP23025 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
XPAP23025 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 LINC00115-201ENST00000473798 1317 ntBASIC14.34□□□□□ -0.11
XPAP23025 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
XPAP23025 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.34□□□□□ -0.11
XPAP23025 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
XPAP23025 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
XPAP23025 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
XPAP23025 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
XPAP23025 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.33□□□□□ -0.11
XPAP23025 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.33□□□□□ -0.11
XPAP23025 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
XPAP23025 PTENP1-202ENST00000532280 3996 ntBASIC14.33□□□□□ -0.12
XPAP23025 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
XPAP23025 AL627231.1-201ENST00000394467 1125 ntBASIC14.33□□□□□ -0.12
XPAP23025 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.33□□□□□ -0.12
XPAP23025 AL807761.2-201ENST00000422849 729 ntBASIC14.33□□□□□ -0.12
XPAP23025 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.33□□□□□ -0.12
XPAP23025 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.33□□□□□ -0.12
XPAP23025 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.33□□□□□ -0.12
XPAP23025 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.33□□□□□ -0.12
XPAP23025 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
XPAP23025 AC079328.1-201ENST00000560358 952 ntBASIC14.33□□□□□ -0.12
XPAP23025 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.33□□□□□ -0.12
XPAP23025 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.33□□□□□ -0.12
XPAP23025 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.33□□□□□ -0.12
XPAP23025 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.33□□□□□ -0.12
XPAP23025 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
XPAP23025 AL133499.1-201ENST00000596207 608 ntBASIC14.33□□□□□ -0.12
XPAP23025 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.33□□□□□ -0.12
XPAP23025 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
XPAP23025 AC007718.1-201ENST00000621078 280 ntBASIC14.33□□□□□ -0.12
XPAP23025 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.33□□□□□ -0.12
XPAP23025 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.33□□□□□ -0.12
XPAP23025 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
XPAP23025 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms