Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.49□□□□□ -0.41
ATF1P18846 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.49□□□□□ -0.41
ATF1P18846 AL358472.3-201ENST00000608147 415 ntBASIC12.49□□□□□ -0.41
ATF1P18846 AL022328.1-201ENST00000610050 478 ntBASIC12.49□□□□□ -0.41
ATF1P18846 AC006453.4-201ENST00000636949 1252 ntBASIC12.49□□□□□ -0.41
ATF1P18846 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.49□□□□□ -0.41
ATF1P18846 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
ATF1P18846 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.49□□□□□ -0.41
ATF1P18846 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
ATF1P18846 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
ATF1P18846 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
ATF1P18846 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ATF1P18846 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 AC104758.3-203ENST00000562938 2123 ntBASIC12.49□□□□□ -0.41
ATF1P18846 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 AL022323.5-201ENST00000624101 2059 ntBASIC12.49□□□□□ -0.41
ATF1P18846 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ATF1P18846 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
ATF1P18846 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.49□□□□□ -0.41
ATF1P18846 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.49□□□□□ -0.41
ATF1P18846 GHET1-201ENST00000627071 1906 ntBASIC12.49□□□□□ -0.41
ATF1P18846 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ATF1P18846 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 MSNP1-201ENST00000511640 1732 ntBASIC12.48□□□□□ -0.41
ATF1P18846 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ATF1P18846 AC108024.1-201ENST00000626286 1721 ntBASIC12.48□□□□□ -0.41
ATF1P18846 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 TNRC18P1-201ENST00000502875 3650 ntBASIC12.48□□□□□ -0.41
ATF1P18846 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ATF1P18846 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.48□□□□□ -0.41
ATF1P18846 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.48□□□□□ -0.41
ATF1P18846 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.48□□□□□ -0.41
ATF1P18846 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.48□□□□□ -0.41
ATF1P18846 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.48□□□□□ -0.41
ATF1P18846 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 USP32P1-208ENST00000506594 1164 ntBASIC12.48□□□□□ -0.41
ATF1P18846 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 AC078819.1-201ENST00000547454 765 ntBASIC12.48□□□□□ -0.41
ATF1P18846 AC012085.1-201ENST00000548270 765 ntBASIC12.48□□□□□ -0.41
ATF1P18846 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.48□□□□□ -0.41
ATF1P18846 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC12.48□□□□□ -0.41
ATF1P18846 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.48□□□□□ -0.41
ATF1P18846 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.48□□□□□ -0.41
ATF1P18846 AC233724.13-201ENST00000598383 410 ntBASIC12.48□□□□□ -0.41
ATF1P18846 AC073413.1-201ENST00000603927 732 ntBASIC12.48□□□□□ -0.41
ATF1P18846 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC12.48□□□□□ -0.41
ATF1P18846 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ATF1P18846 AC138951.2-201ENST00000623455 1161 ntBASIC12.48□□□□□ -0.41
ATF1P18846 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
ATF1P18846 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ATF1P18846 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
ATF1P18846 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms