Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.43■□□□□ 0.22
CAPN2P17655 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CAPN2P17655 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN2P17655 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CAPN2P17655 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CAPN2P17655 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.43■□□□□ 0.22
CAPN2P17655 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.43■□□□□ 0.22
CAPN2P17655 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CAPN2P17655 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN2P17655 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN2P17655 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN2P17655 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
CAPN2P17655 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CAPN2P17655 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.43■□□□□ 0.22
CAPN2P17655 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN2P17655 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN2P17655 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CAPN2P17655 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CAPN2P17655 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.43■□□□□ 0.22
CAPN2P17655 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN2P17655 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN2P17655 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CAPN2P17655 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC16.42■□□□□ 0.22
CAPN2P17655 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN2P17655 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN2P17655 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN2P17655 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN2P17655 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 COX20P1-201ENST00000366529 357 ntBASIC16.42■□□□□ 0.22
CAPN2P17655 HNRNPA1P58-201ENST00000403629 610 ntBASIC16.42■□□□□ 0.22
CAPN2P17655 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN2P17655 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 DUX4L50-201ENST00000455245 715 ntBASIC16.42■□□□□ 0.22
CAPN2P17655 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.42■□□□□ 0.22
CAPN2P17655 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN2P17655 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN2P17655 RN7SL530P-201ENST00000485097 298 ntBASIC16.42■□□□□ 0.22
CAPN2P17655 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN2P17655 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CAPN2P17655 RNA5SP417-201ENST00000516459 108 ntBASIC16.42■□□□□ 0.22
CAPN2P17655 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.42■□□□□ 0.22
CAPN2P17655 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.42■□□□□ 0.22
CAPN2P17655 AC007250.1-201ENST00000608934 338 ntBASIC16.42■□□□□ 0.22
CAPN2P17655 AC006158.1-201ENST00000610661 249 ntBASIC16.42■□□□□ 0.22
CAPN2P17655 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.42■□□□□ 0.22
CAPN2P17655 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN2P17655 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.42■□□□□ 0.22
CAPN2P17655 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CAPN2P17655 CYP4F23P-201ENST00000593402 1579 ntBASIC16.42■□□□□ 0.22
CAPN2P17655 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CAPN2P17655 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.42■□□□□ 0.22
CAPN2P17655 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN2P17655 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN2P17655 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN2P17655 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN2P17655 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN2P17655 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CAPN2P17655 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CAPN2P17655 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN2P17655 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN2P17655 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN2P17655 HSPA7-201ENST00000445535 1927 ntBASIC16.41■□□□□ 0.22
CAPN2P17655 ZBED1P1-201ENST00000502364 1930 ntBASIC16.41■□□□□ 0.22
CAPN2P17655 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.41■□□□□ 0.22
CAPN2P17655 BX640514.1-201ENST00000583223 1918 ntBASIC16.41■□□□□ 0.22
CAPN2P17655 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CAPN2P17655 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN2P17655 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN2P17655 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN2P17655 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CAPN2P17655 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms