Protein–RNA interactions for Protein: P17029

ZKSCAN1, Zinc finger protein with KRAB and SCAN domains 1, humanhuman

Predicted RBP Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1P17029 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 IQSEC3P1-201ENST00000538799 536 ntBASIC17.17■□□□□ 0.34
ZKSCAN1P17029 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 AC140658.4-201ENST00000561990 352 ntBASIC17.17■□□□□ 0.34
ZKSCAN1P17029 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 CYP4F23P-201ENST00000593402 1579 ntBASIC17.17■□□□□ 0.34
ZKSCAN1P17029 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 AL353770.1-201ENST00000614915 403 ntBASIC17.17■□□□□ 0.34
ZKSCAN1P17029 AL136295.7-201ENST00000619226 1200 ntBASIC17.17■□□□□ 0.34
ZKSCAN1P17029 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 AC104581.4-201ENST00000623126 3052 ntBASIC17.17■□□□□ 0.34
ZKSCAN1P17029 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ZKSCAN1P17029 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 AC125604.1-201ENST00000496255 707 ntBASIC17.16■□□□□ 0.34
ZKSCAN1P17029 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 AC018635.2-201ENST00000608625 364 ntBASIC17.16■□□□□ 0.34
ZKSCAN1P17029 AP003419.4-201ENST00000616071 517 ntBASIC17.16■□□□□ 0.34
ZKSCAN1P17029 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 AC068587.8-201ENST00000641239 219 ntBASIC17.16■□□□□ 0.34
ZKSCAN1P17029 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 AHCYP4-201ENST00000419201 1315 ntBASIC17.16■□□□□ 0.34
ZKSCAN1P17029 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZKSCAN1P17029 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZKSCAN1P17029 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms