Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CTLA4P16410 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.59□□□□□ -0.39
CTLA4P16410 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CTLA4P16410 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CTLA4P16410 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CTLA4P16410 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.59□□□□□ -0.39
CTLA4P16410 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.59□□□□□ -0.39
CTLA4P16410 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.59□□□□□ -0.39
CTLA4P16410 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CTLA4P16410 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.59□□□□□ -0.39
CTLA4P16410 AL591846.1-201ENST00000451736 433 ntBASIC12.59□□□□□ -0.39
CTLA4P16410 AC104073.2-201ENST00000453737 312 ntBASIC12.59□□□□□ -0.39
CTLA4P16410 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.59□□□□□ -0.39
CTLA4P16410 AL583810.1-201ENST00000553344 1045 ntBASIC12.59□□□□□ -0.39
CTLA4P16410 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.59□□□□□ -0.39
CTLA4P16410 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.59□□□□□ -0.39
CTLA4P16410 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.59□□□□□ -0.39
CTLA4P16410 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.59□□□□□ -0.39
CTLA4P16410 AC104982.3-201ENST00000581995 514 ntBASIC12.59□□□□□ -0.39
CTLA4P16410 RN7SL163P-201ENST00000583100 276 ntBASIC12.59□□□□□ -0.39
CTLA4P16410 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.59□□□□□ -0.39
CTLA4P16410 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.59□□□□□ -0.39
CTLA4P16410 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.59□□□□□ -0.39
CTLA4P16410 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.59□□□□□ -0.39
CTLA4P16410 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.59□□□□□ -0.39
CTLA4P16410 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.59□□□□□ -0.39
CTLA4P16410 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CTLA4P16410 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CTLA4P16410 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CTLA4P16410 ABCD1P2-201ENST00000429313 1601 ntBASIC12.59□□□□□ -0.39
CTLA4P16410 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CTLA4P16410 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CTLA4P16410 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
CTLA4P16410 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.58□□□□□ -0.39
CTLA4P16410 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
CTLA4P16410 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
CTLA4P16410 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
CTLA4P16410 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CTLA4P16410 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.39
CTLA4P16410 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CTLA4P16410 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CTLA4P16410 AC018735.1-201ENST00000437208 1502 ntBASIC12.58□□□□□ -0.4
CTLA4P16410 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 SALL4P6-201ENST00000429385 1691 ntBASIC12.58□□□□□ -0.4
CTLA4P16410 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CTLA4P16410 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.58□□□□□ -0.4
CTLA4P16410 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.58□□□□□ -0.4
CTLA4P16410 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.58□□□□□ -0.4
CTLA4P16410 AC009474.1-201ENST00000455096 1565 ntBASIC12.58□□□□□ -0.4
CTLA4P16410 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.58□□□□□ -0.4
CTLA4P16410 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.58□□□□□ -0.4
CTLA4P16410 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.58□□□□□ -0.4
CTLA4P16410 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.58□□□□□ -0.4
CTLA4P16410 SNORD3B-2-202ENST00000571722 791 ntBASIC12.58□□□□□ -0.4
CTLA4P16410 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.58□□□□□ -0.4
CTLA4P16410 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.58□□□□□ -0.4
CTLA4P16410 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CTLA4P16410 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.58□□□□□ -0.4
CTLA4P16410 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.58□□□□□ -0.4
CTLA4P16410 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CTLA4P16410 AL359845.1-201ENST00000458202 1648 ntBASIC12.58□□□□□ -0.4
CTLA4P16410 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms