Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC23.2■■□□□ 1.3
CFTRP13569 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CFTRP13569 KRT18P8-201ENST00000581937 1246 ntBASIC23.2■■□□□ 1.3
CFTRP13569 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC23.2■■□□□ 1.3
CFTRP13569 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFTRP13569 AC027601.5-201ENST00000624065 2482 ntBASIC23.2■■□□□ 1.3
CFTRP13569 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFTRP13569 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CFTRP13569 FKBP4P1-201ENST00000507284 1347 ntBASIC23.2■■□□□ 1.3
CFTRP13569 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CFTRP13569 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC23.2■■□□□ 1.3
CFTRP13569 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFTRP13569 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CFTRP13569 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
CFTRP13569 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC23.2■■□□□ 1.3
CFTRP13569 AC020763.3-201ENST00000625095 2904 ntBASIC23.2■■□□□ 1.3
CFTRP13569 CICP24-201ENST00000605464 2705 ntBASIC23.2■■□□□ 1.3
CFTRP13569 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC23.19■■□□□ 1.3
CFTRP13569 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFTRP13569 GOLGA8IP-202ENST00000611635 2100 ntBASIC23.19■■□□□ 1.3
CFTRP13569 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CFTRP13569 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC23.19■■□□□ 1.3
CFTRP13569 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CFTRP13569 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFTRP13569 GSTM2P1-201ENST00000405166 654 ntBASIC23.19■■□□□ 1.3
CFTRP13569 PTPA-219ENST00000435305 530 ntTSL 2 BASIC23.19■■□□□ 1.3
CFTRP13569 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC23.19■■□□□ 1.3
CFTRP13569 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC23.19■■□□□ 1.3
CFTRP13569 AC079336.3-201ENST00000577227 475 ntTSL 3 BASIC23.19■■□□□ 1.3
CFTRP13569 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CFTRP13569 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFTRP13569 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFTRP13569 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CFTRP13569 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CFTRP13569 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFTRP13569 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFTRP13569 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC23.19■■□□□ 1.3
CFTRP13569 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CFTRP13569 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
CFTRP13569 MIR766-201ENST00000390223 111 ntBASIC23.18■■□□□ 1.3
CFTRP13569 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC23.18■■□□□ 1.3
CFTRP13569 SNORA50C-201ENST00000408535 133 ntBASIC23.18■■□□□ 1.3
CFTRP13569 AC012100.1-201ENST00000470304 282 ntBASIC23.18■■□□□ 1.3
CFTRP13569 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC23.18■■□□□ 1.3
CFTRP13569 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC23.18■■□□□ 1.3
CFTRP13569 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CFTRP13569 AL109983.1-201ENST00000603234 646 ntBASIC23.18■■□□□ 1.3
CFTRP13569 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC23.18■■□□□ 1.3
CFTRP13569 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CFTRP13569 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC23.18■■□□□ 1.3
CFTRP13569 SNORA50.1-201ENST00000628590 135 ntBASIC23.18■■□□□ 1.3
CFTRP13569 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CFTRP13569 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC23.18■■□□□ 1.3
CFTRP13569 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CFTRP13569 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CFTRP13569 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CFTRP13569 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CFTRP13569 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC23.18■■□□□ 1.3
CFTRP13569 ZCCHC9-203ENST00000407610 1555 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CFTRP13569 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC23.18■■□□□ 1.3
CFTRP13569 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC23.18■■□□□ 1.3
CFTRP13569 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CFTRP13569 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC23.18■■□□□ 1.3
CFTRP13569 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CFTRP13569 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC23.17■■□□□ 1.3
CFTRP13569 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC23.17■■□□□ 1.3
CFTRP13569 HNRNPA1P55-201ENST00000505935 955 ntBASIC23.17■■□□□ 1.3
CFTRP13569 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC23.17■■□□□ 1.3
CFTRP13569 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 CYP4F10P-201ENST00000589560 752 ntBASIC23.17■■□□□ 1.3
CFTRP13569 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
CFTRP13569 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CFTRP13569 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC23.17■■□□□ 1.3
CFTRP13569 ZSCAN5DP-201ENST00000600684 1488 ntBASIC23.17■■□□□ 1.3
CFTRP13569 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC23.17■■□□□ 1.3
CFTRP13569 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 AC104640.1-201ENST00000562617 2109 ntBASIC23.17■■□□□ 1.3
CFTRP13569 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CFTRP13569 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
CFTRP13569 SPTLC1P3-201ENST00000403408 259 ntBASIC23.17■■□□□ 1.3
CFTRP13569 AC005822.1-201ENST00000414124 1034 ntBASIC23.17■■□□□ 1.3
CFTRP13569 TEDDM2P-201ENST00000414169 786 ntBASIC23.17■■□□□ 1.3
CFTRP13569 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC23.17■■□□□ 1.3
CFTRP13569 PRDX3P2-201ENST00000447051 611 ntBASIC23.17■■□□□ 1.3
CFTRP13569 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC23.17■■□□□ 1.3
CFTRP13569 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms