Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
COX6A1P12074 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COX6A1P12074 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
COX6A1P12074 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
COX6A1P12074 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
COX6A1P12074 AC073210.1-201ENST00000414799 232 ntBASIC12.94□□□□□ -0.34
COX6A1P12074 AC108734.2-201ENST00000420887 1069 ntBASIC12.94□□□□□ -0.34
COX6A1P12074 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
COX6A1P12074 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COX6A1P12074 AC005722.1-201ENST00000431878 964 ntBASIC12.94□□□□□ -0.34
COX6A1P12074 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC12.94□□□□□ -0.34
COX6A1P12074 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.94□□□□□ -0.34
COX6A1P12074 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC12.94□□□□□ -0.34
COX6A1P12074 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC12.94□□□□□ -0.34
COX6A1P12074 OR2A1-AS1-210ENST00000496968 531 ntBASIC12.94□□□□□ -0.34
COX6A1P12074 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.94□□□□□ -0.34
COX6A1P12074 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
COX6A1P12074 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC12.94□□□□□ -0.34
COX6A1P12074 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COX6A1P12074 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
COX6A1P12074 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COX6A1P12074 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COX6A1P12074 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC12.94□□□□□ -0.34
COX6A1P12074 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.94□□□□□ -0.34
COX6A1P12074 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
COX6A1P12074 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COX6A1P12074 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COX6A1P12074 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.94□□□□□ -0.34
COX6A1P12074 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.94□□□□□ -0.34
COX6A1P12074 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
COX6A1P12074 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COX6A1P12074 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
COX6A1P12074 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COX6A1P12074 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.94□□□□□ -0.34
COX6A1P12074 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.93□□□□□ -0.34
COX6A1P12074 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
COX6A1P12074 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.93□□□□□ -0.34
COX6A1P12074 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.93□□□□□ -0.34
COX6A1P12074 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
COX6A1P12074 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.93□□□□□ -0.34
COX6A1P12074 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
COX6A1P12074 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.93□□□□□ -0.34
COX6A1P12074 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
COX6A1P12074 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.93□□□□□ -0.34
COX6A1P12074 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
COX6A1P12074 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
COX6A1P12074 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.93□□□□□ -0.34
COX6A1P12074 RPL13AP19-201ENST00000434320 584 ntBASIC12.93□□□□□ -0.34
COX6A1P12074 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
COX6A1P12074 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
COX6A1P12074 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.93□□□□□ -0.34
COX6A1P12074 MIR4472-1-201ENST00000584349 80 ntBASIC12.93□□□□□ -0.34
COX6A1P12074 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC12.93□□□□□ -0.34
COX6A1P12074 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.93□□□□□ -0.34
COX6A1P12074 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.93□□□□□ -0.34
COX6A1P12074 OR2I1P-210ENST00000642037 4691 ntBASIC12.93□□□□□ -0.34
COX6A1P12074 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
COX6A1P12074 MST1P2-201ENST00000457982 2291 ntBASIC12.93□□□□□ -0.34
COX6A1P12074 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.93□□□□□ -0.34
COX6A1P12074 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
COX6A1P12074 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.93□□□□□ -0.34
COX6A1P12074 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
COX6A1P12074 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
COX6A1P12074 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.93□□□□□ -0.34
COX6A1P12074 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
COX6A1P12074 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COX6A1P12074 AC093462.1-201ENST00000621167 1683 ntBASIC12.93□□□□□ -0.34
COX6A1P12074 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
COX6A1P12074 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
COX6A1P12074 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
COX6A1P12074 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.92□□□□□ -0.34
COX6A1P12074 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
COX6A1P12074 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms