Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 FTH1P22-201ENST00000456305 520 ntBASIC16.66■□□□□ 0.26
TOP1P11387 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.66■□□□□ 0.26
TOP1P11387 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP1P11387 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.66■□□□□ 0.26
TOP1P11387 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.66■□□□□ 0.26
TOP1P11387 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.66■□□□□ 0.26
TOP1P11387 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TOP1P11387 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TOP1P11387 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.66■□□□□ 0.26
TOP1P11387 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP1P11387 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP1P11387 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TOP1P11387 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TOP1P11387 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TOP1P11387 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.66■□□□□ 0.26
TOP1P11387 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 SHMT1P1-201ENST00000419974 1312 ntBASIC16.66■□□□□ 0.26
TOP1P11387 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.66■□□□□ 0.26
TOP1P11387 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TOP1P11387 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.65■□□□□ 0.26
TOP1P11387 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC16.65■□□□□ 0.26
TOP1P11387 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.65■□□□□ 0.26
TOP1P11387 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TOP1P11387 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.65■□□□□ 0.26
TOP1P11387 AL137784.3-201ENST00000623858 2288 ntBASIC16.65■□□□□ 0.26
TOP1P11387 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TOP1P11387 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.65■□□□□ 0.26
TOP1P11387 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.65■□□□□ 0.26
TOP1P11387 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.65■□□□□ 0.26
TOP1P11387 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.65■□□□□ 0.26
TOP1P11387 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.65■□□□□ 0.26
TOP1P11387 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC16.65■□□□□ 0.26
TOP1P11387 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.65■□□□□ 0.26
TOP1P11387 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TOP1P11387 AC103691.2-201ENST00000618824 433 ntBASIC16.65■□□□□ 0.26
TOP1P11387 AC128714.1-201ENST00000637035 887 ntBASIC16.65■□□□□ 0.26
TOP1P11387 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TOP1P11387 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC16.65■□□□□ 0.26
TOP1P11387 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.65■□□□□ 0.26
TOP1P11387 RPL13AP3-202ENST00000494676 1473 ntBASIC16.65■□□□□ 0.26
TOP1P11387 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.65■□□□□ 0.26
TOP1P11387 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TOP1P11387 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TOP1P11387 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TOP1P11387 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.65■□□□□ 0.26
TOP1P11387 AC089987.1-201ENST00000551654 2209 ntBASIC16.65■□□□□ 0.26
TOP1P11387 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TOP1P11387 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TOP1P11387 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TOP1P11387 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TOP1P11387 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TOP1P11387 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TOP1P11387 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC16.64■□□□□ 0.25
TOP1P11387 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TOP1P11387 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.64■□□□□ 0.25
TOP1P11387 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TOP1P11387 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.64■□□□□ 0.25
TOP1P11387 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.64■□□□□ 0.25
TOP1P11387 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
TOP1P11387 MIR645-201ENST00000385283 94 ntBASIC16.64■□□□□ 0.25
TOP1P11387 AC026316.1-201ENST00000398900 414 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms