Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM228BP0C875 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM228BP0C875 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM228BP0C875 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM228BP0C875 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 RPL18P13-201ENST00000478088 569 ntBASIC15.12■□□□□ 0.01
FAM228BP0C875 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
FAM228BP0C875 AC005730.2-201ENST00000564549 1184 ntBASIC15.12■□□□□ 0.01
FAM228BP0C875 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.12■□□□□ 0.01
FAM228BP0C875 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 AC005324.6-201ENST00000587972 613 ntBASIC15.12■□□□□ 0.01
FAM228BP0C875 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.12■□□□□ 0.01
FAM228BP0C875 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FAM228BP0C875 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM228BP0C875 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 AC131212.3-201ENST00000624087 4219 ntBASIC15.12■□□□□ 0.01
FAM228BP0C875 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM228BP0C875 Z82170.1-201ENST00000625081 3192 ntBASIC15.12■□□□□ 0.01
FAM228BP0C875 MSNP1-201ENST00000511640 1732 ntBASIC15.12■□□□□ 0.01
FAM228BP0C875 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM228BP0C875 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
FAM228BP0C875 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 AC020917.4-201ENST00000623994 1999 ntBASIC15.11■□□□□ 0.01
FAM228BP0C875 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 PCDHB18P-202ENST00000526308 3197 ntBASIC15.11■□□□□ 0.01
FAM228BP0C875 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
FAM228BP0C875 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
FAM228BP0C875 MIR1909-201ENST00000411312 80 ntBASIC15.11■□□□□ 0.01
FAM228BP0C875 AC099336.1-201ENST00000417053 1171 ntBASIC15.11■□□□□ 0.01
FAM228BP0C875 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 AC234783.1-201ENST00000441761 496 ntBASIC15.11■□□□□ 0.01
FAM228BP0C875 CSF2RBP1-201ENST00000447905 391 ntBASIC15.11■□□□□ 0.01
FAM228BP0C875 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.11■□□□□ 0.01
FAM228BP0C875 AC005225.4-201ENST00000557330 545 ntBASIC15.11■□□□□ 0.01
FAM228BP0C875 DUX4L45-201ENST00000566406 1057 ntBASIC15.11■□□□□ 0.01
FAM228BP0C875 AC008805.1-201ENST00000590892 364 ntBASIC15.11■□□□□ 0.01
FAM228BP0C875 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM228BP0C875 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM228BP0C875 RPL13AP3-202ENST00000494676 1473 ntBASIC15.11■□□□□ 0.01
FAM228BP0C875 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
FAM228BP0C875 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
FAM228BP0C875 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
FAM228BP0C875 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM228BP0C875 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM228BP0C875 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
FAM228BP0C875 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.11■□□□□ 0.01
FAM228BP0C875 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.11■□□□□ 0.01
FAM228BP0C875 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.11■□□□□ 0.01
FAM228BP0C875 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
FAM228BP0C875 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.11■□□□□ 0.01
FAM228BP0C875 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM228BP0C875 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC15.1■□□□□ 0.01
FAM228BP0C875 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
FAM228BP0C875 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 LINC00567-201ENST00000569854 3409 ntBASIC15.1■□□□□ 0.01
FAM228BP0C875 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.1■□□□□ 0.01
FAM228BP0C875 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FAM228BP0C875 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.1■□□□□ 0.01
FAM228BP0C875 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms