Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.56■□□□□ 0.08
CLTAP09496 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CLTAP09496 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLTAP09496 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
CLTAP09496 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLTAP09496 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CLTAP09496 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.55■□□□□ 0.08
CLTAP09496 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.55■□□□□ 0.08
CLTAP09496 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.55■□□□□ 0.08
CLTAP09496 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.55■□□□□ 0.08
CLTAP09496 AC007952.5-201ENST00000572818 1486 ntBASIC15.55■□□□□ 0.08
CLTAP09496 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.55■□□□□ 0.08
CLTAP09496 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 FAM90A2P-201ENST00000511144 1395 ntBASIC15.55■□□□□ 0.08
CLTAP09496 FAM90A25P-201ENST00000528404 1395 ntBASIC15.55■□□□□ 0.08
CLTAP09496 TUBB8P4-201ENST00000511806 1324 ntBASIC15.55■□□□□ 0.08
CLTAP09496 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.55■□□□□ 0.08
CLTAP09496 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.55■□□□□ 0.08
CLTAP09496 USP17L6P-201ENST00000382470 1197 ntBASIC15.55■□□□□ 0.08
CLTAP09496 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.55■□□□□ 0.08
CLTAP09496 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.55■□□□□ 0.08
CLTAP09496 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 RPSAP15-201ENST00000448168 861 ntBASIC15.55■□□□□ 0.08
CLTAP09496 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.55■□□□□ 0.08
CLTAP09496 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.55■□□□□ 0.08
CLTAP09496 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.55■□□□□ 0.08
CLTAP09496 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.55■□□□□ 0.08
CLTAP09496 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 AC105129.2-201ENST00000559536 390 ntBASIC15.55■□□□□ 0.08
CLTAP09496 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.55■□□□□ 0.08
CLTAP09496 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.55■□□□□ 0.08
CLTAP09496 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.55■□□□□ 0.08
CLTAP09496 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.55■□□□□ 0.08
CLTAP09496 AC012044.1-201ENST00000603431 297 ntBASIC15.55■□□□□ 0.08
CLTAP09496 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLTAP09496 AC006453.1-201ENST00000636037 1257 ntBASIC15.55■□□□□ 0.08
CLTAP09496 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLTAP09496 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.55■□□□□ 0.08
CLTAP09496 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLTAP09496 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLTAP09496 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CLTAP09496 Z82170.1-201ENST00000625081 3192 ntBASIC15.55■□□□□ 0.08
CLTAP09496 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLTAP09496 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CLTAP09496 BRD7P5-201ENST00000299197 1822 ntBASIC15.54■□□□□ 0.08
CLTAP09496 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLTAP09496 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLTAP09496 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLTAP09496 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLTAP09496 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLTAP09496 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CLTAP09496 LINC01815-202ENST00000641468 1409 ntBASIC15.54■□□□□ 0.08
CLTAP09496 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CLTAP09496 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLTAP09496 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CLTAP09496 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLTAP09496 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLTAP09496 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CLTAP09496 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CLTAP09496 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLTAP09496 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLTAP09496 KRT17P5-201ENST00000332088 839 ntBASIC15.54■□□□□ 0.08
CLTAP09496 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CLTAP09496 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.54■□□□□ 0.08
CLTAP09496 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.54■□□□□ 0.08
CLTAP09496 AC134698.3-201ENST00000523880 214 ntBASIC15.54■□□□□ 0.08
CLTAP09496 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC15.54■□□□□ 0.08
CLTAP09496 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
CLTAP09496 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.54■□□□□ 0.08
CLTAP09496 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CLTAP09496 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC15.54■□□□□ 0.08
CLTAP09496 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.54■□□□□ 0.08
CLTAP09496 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.54■□□□□ 0.08
CLTAP09496 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLTAP09496 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
CLTAP09496 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.54■□□□□ 0.08
CLTAP09496 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.54■□□□□ 0.08
CLTAP09496 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms