Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
KRT6AP02538 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
KRT6AP02538 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 YBX1P6-201ENST00000442962 1002 ntBASIC13.81□□□□□ -0.2
KRT6AP02538 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.81□□□□□ -0.2
KRT6AP02538 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
KRT6AP02538 PGAM1P5-201ENST00000548011 764 ntBASIC13.81□□□□□ -0.2
KRT6AP02538 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.81□□□□□ -0.2
KRT6AP02538 AL160314.3-201ENST00000556041 767 ntBASIC13.81□□□□□ -0.2
KRT6AP02538 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.81□□□□□ -0.2
KRT6AP02538 CR392039.2-201ENST00000623182 509 ntBASIC13.81□□□□□ -0.2
KRT6AP02538 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.81□□□□□ -0.2
KRT6AP02538 AC005562.1-201ENST00000583030 3219 ntBASIC13.81□□□□□ -0.2
KRT6AP02538 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
KRT6AP02538 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.81□□□□□ -0.2
KRT6AP02538 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
KRT6AP02538 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
KRT6AP02538 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KRT6AP02538 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.81□□□□□ -0.2
KRT6AP02538 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
KRT6AP02538 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
KRT6AP02538 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
KRT6AP02538 AC061965.1-201ENST00000560524 1465 ntBASIC13.8□□□□□ -0.2
KRT6AP02538 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.8□□□□□ -0.2
KRT6AP02538 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.8□□□□□ -0.2
KRT6AP02538 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
KRT6AP02538 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
KRT6AP02538 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 AC103592.1-201ENST00000394513 664 ntBASIC13.8□□□□□ -0.2
KRT6AP02538 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
KRT6AP02538 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
KRT6AP02538 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 AL035633.1-201ENST00000406139 838 ntBASIC13.8□□□□□ -0.2
KRT6AP02538 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.8□□□□□ -0.2
KRT6AP02538 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.8□□□□□ -0.2
KRT6AP02538 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.8□□□□□ -0.2
KRT6AP02538 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 MIR4741-201ENST00000579822 90 ntBASIC13.8□□□□□ -0.2
KRT6AP02538 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.8□□□□□ -0.2
KRT6AP02538 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.8□□□□□ -0.2
KRT6AP02538 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
KRT6AP02538 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KRT6AP02538 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms