Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PFDN6O15212 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN6O15212 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN6O15212 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN6O15212 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.29□□□□□ -0.12
PFDN6O15212 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN6O15212 AC007952.5-201ENST00000572818 1486 ntBASIC14.29□□□□□ -0.12
PFDN6O15212 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.29□□□□□ -0.12
PFDN6O15212 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.29□□□□□ -0.12
PFDN6O15212 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PFDN6O15212 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN6O15212 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PFDN6O15212 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.29□□□□□ -0.12
PFDN6O15212 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN6O15212 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN6O15212 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN6O15212 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN6O15212 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN6O15212 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
PFDN6O15212 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.29□□□□□ -0.12
PFDN6O15212 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN6O15212 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.29□□□□□ -0.12
PFDN6O15212 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.28□□□□□ -0.12
PFDN6O15212 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
PFDN6O15212 AC103592.1-201ENST00000394513 664 ntBASIC14.28□□□□□ -0.12
PFDN6O15212 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.28□□□□□ -0.12
PFDN6O15212 MIR663B-201ENST00000408361 115 ntBASIC14.28□□□□□ -0.12
PFDN6O15212 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.28□□□□□ -0.12
PFDN6O15212 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
PFDN6O15212 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.28□□□□□ -0.12
PFDN6O15212 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.28□□□□□ -0.12
PFDN6O15212 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.28□□□□□ -0.12
PFDN6O15212 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.28□□□□□ -0.12
PFDN6O15212 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 AC007663.3-201ENST00000609632 465 ntBASIC14.28□□□□□ -0.12
PFDN6O15212 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
PFDN6O15212 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC14.28□□□□□ -0.12
PFDN6O15212 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PFDN6O15212 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
PFDN6O15212 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PFDN6O15212 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.27□□□□□ -0.12
PFDN6O15212 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
PFDN6O15212 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.27□□□□□ -0.12
PFDN6O15212 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.27□□□□□ -0.12
PFDN6O15212 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PFDN6O15212 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.27□□□□□ -0.12
PFDN6O15212 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PFDN6O15212 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN6O15212 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN6O15212 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PFDN6O15212 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms