Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 AL021155.1-201ENST00000438808 2637 ntBASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 AC107890.1-201ENST00000422478 521 ntBASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 TSSK5P-201ENST00000423978 907 ntBASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 MESTP3-201ENST00000503460 968 ntBASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 AC135586.1-201ENST00000539323 574 ntBASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 AP005019.2-201ENST00000615104 511 ntBASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 AC009093.10-201ENST00000641956 1442 ntBASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 AC073862.5-201ENST00000624129 2027 ntBASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RCL1Q9Y2P8 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
RCL1Q9Y2P8 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
RCL1Q9Y2P8 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.65□□□□□ -0.55
RCL1Q9Y2P8 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
RCL1Q9Y2P8 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
RCL1Q9Y2P8 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
RCL1Q9Y2P8 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 PCDHB17P-202ENST00000623466 3066 ntBASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 MAPK10-262ENST00000641051 5738 ntBASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 INE1-201ENST00000456273 945 ntBASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RCL1Q9Y2P8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms