Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 AC011474.4-201ENST00000623523 2076 ntBASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 MIR3907-201ENST00000579424 151 ntBASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AC107918.4-201ENST00000641966 3141 ntBASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AL157791.1-201ENST00000553667 1699 ntBASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 SPTLC1P5-201ENST00000450718 252 ntBASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 OR13I1P-201ENST00000609811 1264 ntBASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AP000240.1-201ENST00000609910 452 ntBASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AC079336.7-201ENST00000623428 1078 ntBASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AC100757.4-201ENST00000626934 759 ntBASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 NAP1L6-202ENST00000641404 1222 ntBASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 LINC00115-201ENST00000473798 1317 ntBASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 KRT8P24-201ENST00000560290 1559 ntBASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CUEDC1Q9NWM3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms