Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 ACKR1-201ENST00000368121 1240 ntBASIC12.66□□□□□ -0.38
RFT1Q96AA3 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 AC236430.1-201ENST00000402231 743 ntBASIC12.66□□□□□ -0.38
RFT1Q96AA3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 GCOM2-201ENST00000509133 1104 ntBASIC12.66□□□□□ -0.38
RFT1Q96AA3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 AC145423.3-201ENST00000615987 467 ntBASIC12.66□□□□□ -0.38
RFT1Q96AA3 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 LINC00567-201ENST00000569854 3409 ntBASIC12.66□□□□□ -0.38
RFT1Q96AA3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RFT1Q96AA3 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.66□□□□□ -0.38
RFT1Q96AA3 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 FKBP4P6-201ENST00000457486 1332 ntBASIC12.65□□□□□ -0.38
RFT1Q96AA3 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.65□□□□□ -0.38
RFT1Q96AA3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 AC245100.3-201ENST00000441281 285 ntBASIC12.65□□□□□ -0.38
RFT1Q96AA3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 AC140912.1-201ENST00000577171 1054 ntBASIC12.65□□□□□ -0.38
RFT1Q96AA3 RN7SL204P-201ENST00000582831 262 ntBASIC12.65□□□□□ -0.38
RFT1Q96AA3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 AL033527.5-201ENST00000641382 801 ntBASIC12.65□□□□□ -0.38
RFT1Q96AA3 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RFT1Q96AA3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC12.65□□□□□ -0.38
RFT1Q96AA3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.64□□□□□ -0.39
RFT1Q96AA3 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms