Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC073869.2-201ENST00000417338 1026 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 AC006335.1-201ENST00000445200 547 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 RPSAP15-201ENST00000448168 861 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 RN7SL11P-201ENST00000471305 293 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 GPR182-203ENST00000622922 591 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 SNORA50.1-201ENST00000628590 135 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 KRT8P43-201ENST00000406052 1458 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 AC004554.1-201ENST00000422830 1468 ntBASIC12.45□□□□□ -0.42
TMEM54Q969K7 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.45□□□□□ -0.42
TMEM54Q969K7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TMEM54Q969K7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 AC009474.1-201ENST00000455096 1565 ntBASIC12.44□□□□□ -0.42
TMEM54Q969K7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 CALR4P-201ENST00000431943 946 ntBASIC12.44□□□□□ -0.42
TMEM54Q969K7 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 AC024681.1-201ENST00000521917 487 ntBASIC12.44□□□□□ -0.42
TMEM54Q969K7 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 AL133467.4-201ENST00000602953 725 ntBASIC12.44□□□□□ -0.42
TMEM54Q969K7 AL109837.1-201ENST00000603272 613 ntBASIC12.44□□□□□ -0.42
TMEM54Q969K7 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 AC015967.2-201ENST00000624092 234 ntBASIC12.44□□□□□ -0.42
TMEM54Q969K7 AC006435.4-201ENST00000625037 234 ntBASIC12.44□□□□□ -0.42
TMEM54Q969K7 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 AL356737.1-201ENST00000634391 234 ntBASIC12.44□□□□□ -0.42
TMEM54Q969K7 AL139424.3-202ENST00000641619 917 ntBASIC12.44□□□□□ -0.42
TMEM54Q969K7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
TMEM54Q969K7 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TMEM54Q969K7 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms