Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 AC026320.2-201ENST00000434379 478 ntBASIC13.48□□□□□ -0.25
TM9SF4Q92544 RN7SL8P-201ENST00000461771 266 ntBASIC13.48□□□□□ -0.25
TM9SF4Q92544 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 RN7SL67P-201ENST00000492147 296 ntBASIC13.48□□□□□ -0.25
TM9SF4Q92544 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 MIR3147-201ENST00000577811 66 ntBASIC13.48□□□□□ -0.25
TM9SF4Q92544 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 MIR5572-201ENST00000583188 137 ntBASIC13.48□□□□□ -0.25
TM9SF4Q92544 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 AC011491.1-203ENST00000637688 543 ntBASIC13.48□□□□□ -0.25
TM9SF4Q92544 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 KRT8P24-201ENST00000560290 1559 ntBASIC13.48□□□□□ -0.25
TM9SF4Q92544 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.48□□□□□ -0.25
TM9SF4Q92544 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TM9SF4Q92544 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 CICP16-201ENST00000502609 2813 ntBASIC13.47□□□□□ -0.25
TM9SF4Q92544 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 KRT18P9-201ENST00000604826 1300 ntBASIC13.47□□□□□ -0.25
TM9SF4Q92544 AC074138.1-201ENST00000611182 1303 ntBASIC13.47□□□□□ -0.25
TM9SF4Q92544 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 RPL7P35-201ENST00000446943 740 ntBASIC13.47□□□□□ -0.25
TM9SF4Q92544 AC079112.1-201ENST00000454972 939 ntBASIC13.47□□□□□ -0.25
TM9SF4Q92544 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 RN7SL181P-201ENST00000462921 277 ntBASIC13.47□□□□□ -0.25
TM9SF4Q92544 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.47□□□□□ -0.25
TM9SF4Q92544 PGAM1P5-201ENST00000548011 764 ntBASIC13.47□□□□□ -0.25
TM9SF4Q92544 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TM9SF4Q92544 MIR4750-201ENST00000584564 56 ntBASIC13.47□□□□□ -0.25
TM9SF4Q92544 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms