Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.03□□□□□ -0.48
RTN4IP1Q8WWV3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RTN4IP1Q8WWV3 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
RTN4IP1Q8WWV3 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RTN4IP1Q8WWV3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.02□□□□□ -0.48
RTN4IP1Q8WWV3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RTN4IP1Q8WWV3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.02□□□□□ -0.48
RTN4IP1Q8WWV3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
RTN4IP1Q8WWV3 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
RTN4IP1Q8WWV3 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.02□□□□□ -0.48
RTN4IP1Q8WWV3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
RTN4IP1Q8WWV3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AC005034.1-201ENST00000426657 489 ntBASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AC234783.1-201ENST00000441761 496 ntBASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 CROCCP4-201ENST00000457096 498 ntBASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AP000812.2-201ENST00000538934 718 ntBASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AC027237.1-201ENST00000560942 655 ntBASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AC005586.2-201ENST00000563946 837 ntBASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AL162274.1-201ENST00000617191 1098 ntBASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 RHOXF1P1-202ENST00000635473 501 ntBASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 PTPRVP-205ENST00000641549 5067 ntBASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AC009093.2-202ENST00000620513 2079 ntBASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.02□□□□□ -0.49
RTN4IP1Q8WWV3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 PDIA3P1-201ENST00000471856 1510 ntBASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 AP002761.4-201ENST00000565433 3361 ntBASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.01□□□□□ -0.49
RTN4IP1Q8WWV3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms