Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHKBP1Q8TBC3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 AC095040.1-201ENST00000513286 675 ntBASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 OR5BD1P-201ENST00000532527 817 ntBASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 AL021707.6-201ENST00000609212 491 ntBASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 AC011474.4-201ENST00000623523 2076 ntBASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SHKBP1Q8TBC3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 PYY2-201ENST00000315776 282 ntBASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 AC097065.1-201ENST00000425737 517 ntBASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 AC018638.5-201ENST00000450885 754 ntBASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC14.87□□□□□ -0.03
SHKBP1Q8TBC3 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms