Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 GOLGA8EP-201ENST00000530246 1959 ntBASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL22A1Q8NFW1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 HLA-DQB3-203ENST00000425319 356 ntBASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 AC010677.1-201ENST00000441690 412 ntBASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 AKR1B1P3-201ENST00000525311 588 ntBASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 AC009132.1-201ENST00000565194 320 ntBASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 CALM3-206ENST00000594523 540 ntTSL 4 BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 RBP1-206ENST00000617459 667 ntTSL 2 BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 AC061965.1-201ENST00000560524 1465 ntBASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
COL22A1Q8NFW1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
COL22A1Q8NFW1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.02■□□□□ 0.47
COL22A1Q8NFW1 MRPS16P3-201ENST00000415961 374 ntBASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 NUP210P2-201ENST00000510577 282 ntBASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 TMEM106A-201ENST00000536052 1181 ntTSL 2 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 BCAR1P1-201ENST00000553953 636 ntBASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 AP001120.3-201ENST00000585729 489 ntBASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 MRPL34-206ENST00000602206 603 ntTSL 3 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 AC007274.3-201ENST00000619838 385 ntBASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 ZSCAN5DP-201ENST00000600684 1488 ntBASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 AC020910.6-201ENST00000623084 1459 ntBASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 CDC20P1-201ENST00000488829 1500 ntBASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 COQ4-202ENST00000372875 928 ntTSL 2 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 ZDHHC8P1-202ENST00000418264 1403 ntBASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 PDLIM1P1-201ENST00000604187 969 ntBASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 IFI27-214ENST00000620396 599 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 AC009118.3-201ENST00000622896 873 ntBASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL22A1Q8NFW1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL22A1Q8NFW1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 CICP14-201ENST00000629111 2732 ntBASIC18■□□□□ 0.47
COL22A1Q8NFW1 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL22A1Q8NFW1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL22A1Q8NFW1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL22A1Q8NFW1 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL22A1Q8NFW1 ZNF577-202ENST00000451628 1771 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL22A1Q8NFW1 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL22A1Q8NFW1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL22A1Q8NFW1 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL22A1Q8NFW1 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL22A1Q8NFW1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL22A1Q8NFW1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18■□□□□ 0.47
COL22A1Q8NFW1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms