Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
TTC9CQ8N5M4 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 AC078875.1-201ENST00000431907 724 ntBASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 SNORD3B-2-202ENST00000571722 791 ntBASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 AC090164.2-201ENST00000611487 516 ntBASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 AC091271.1-201ENST00000611877 1162 ntBASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 AC005695.3-201ENST00000614522 232 ntBASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 CICP8-201ENST00000455800 2813 ntBASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 AP002353.1-201ENST00000528257 1599 ntBASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
TTC9CQ8N5M4 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 DGCR9-201ENST00000609630 2415 ntBASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 COL6A4P2-202ENST00000504443 2753 ntBASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 DPM3-202ENST00000368399 517 ntBASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 KRTAP10-13P-201ENST00000412914 571 ntBASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 SERPINA13P-202ENST00000478994 924 ntBASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 AC126915.1-201ENST00000522847 1038 ntBASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 EID1-202ENST00000560490 584 ntTSL 3 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
TTC9CQ8N5M4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms