Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 Z98885.3-201ENST00000624882 1757 ntBASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
C12orf56Q8IXR9 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 AF013593.1-201ENST00000458074 1487 ntBASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 AC105206.1-202ENST00000314927 2368 ntBASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 AC067750.1-201ENST00000608826 6545 ntBASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 AC007279.1-201ENST00000448547 837 ntBASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 AC132825.4-202ENST00000578792 434 ntBASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 AL356740.1-201ENST00000602192 1297 ntBASIC15.27■□□□□ 0.04
C12orf56Q8IXR9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.27■□□□□ 0.03
C12orf56Q8IXR9 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 AC138761.6-201ENST00000583997 1423 ntBASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 AC108024.1-201ENST00000626286 1721 ntBASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 AL583805.1-201ENST00000391389 531 ntBASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 AL807761.2-201ENST00000422849 729 ntBASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 AL133466.1-201ENST00000447582 150 ntBASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 COQ10BP2-201ENST00000513804 724 ntBASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 CHMP4BP1-201ENST00000556017 588 ntBASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
C12orf56Q8IXR9 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms