Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC091181.1-201ENST00000623762 2098 ntBASIC14.79□□□□□ -0.04
CBX1P83916 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CBX1P83916 AL590440.2-201ENST00000641973 1595 ntBASIC14.79□□□□□ -0.04
CBX1P83916 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC14.79□□□□□ -0.04
CBX1P83916 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CBX1P83916 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CBX1P83916 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CBX1P83916 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CBX1P83916 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CBX1P83916 SARDH-207ENST00000439388 3216 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CBX1P83916 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC14.79□□□□□ -0.04
CBX1P83916 C1S-221ENST00000617865 2844 ntTSL 5 BASIC14.79□□□□□ -0.04
CBX1P83916 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CBX1P83916 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CBX1P83916 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CBX1P83916 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.78□□□□□ -0.04
CBX1P83916 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC14.78□□□□□ -0.04
CBX1P83916 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.78□□□□□ -0.04
CBX1P83916 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 KRT18P64-201ENST00000434946 1219 ntBASIC14.78□□□□□ -0.04
CBX1P83916 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.78□□□□□ -0.04
CBX1P83916 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.78□□□□□ -0.04
CBX1P83916 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.78□□□□□ -0.04
CBX1P83916 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.78□□□□□ -0.04
CBX1P83916 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.78□□□□□ -0.04
CBX1P83916 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.78□□□□□ -0.04
CBX1P83916 AL356488.2-201ENST00000602755 427 ntBASIC14.78□□□□□ -0.04
CBX1P83916 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.78□□□□□ -0.04
CBX1P83916 REXO1L6P-202ENST00000619970 1078 ntBASIC14.78□□□□□ -0.04
CBX1P83916 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC14.78□□□□□ -0.04
CBX1P83916 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 GPALPP1-202ENST00000361121 3410 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC14.78□□□□□ -0.04
CBX1P83916 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC14.78□□□□□ -0.04
CBX1P83916 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CBX1P83916 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.78□□□□□ -0.04
CBX1P83916 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CBX1P83916 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CBX1P83916 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CBX1P83916 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CBX1P83916 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CBX1P83916 MRPL37P1-201ENST00000592451 1337 ntBASIC14.77□□□□□ -0.04
CBX1P83916 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CBX1P83916 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CBX1P83916 USP17L6P-201ENST00000382470 1197 ntBASIC14.77□□□□□ -0.05
CBX1P83916 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.77□□□□□ -0.05
CBX1P83916 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.77□□□□□ -0.05
CBX1P83916 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CBX1P83916 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.77□□□□□ -0.05
CBX1P83916 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.77□□□□□ -0.05
CBX1P83916 AC026979.3-201ENST00000607315 403 ntBASIC14.77□□□□□ -0.05
CBX1P83916 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.77□□□□□ -0.05
CBX1P83916 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CBX1P83916 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.77□□□□□ -0.05
CBX1P83916 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.77□□□□□ -0.05
CBX1P83916 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CBX1P83916 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CBX1P83916 BISPR-204ENST00000634675 1806 ntTSL 2 BASIC14.77□□□□□ -0.05
CBX1P83916 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC14.77□□□□□ -0.05
CBX1P83916 ADCY5-201ENST00000309879 2841 ntTSL 2 BASIC14.77□□□□□ -0.05
CBX1P83916 APOL3-205ENST00000397293 2214 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CBX1P83916 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CBX1P83916 TSPAN9-201ENST00000011898 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CBX1P83916 ZMYND11-203ENST00000381591 4229 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CBX1P83916 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CBX1P83916 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CBX1P83916 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CBX1P83916 LINC01122-207ENST00000452840 4077 ntTSL 5 BASIC14.77□□□□□ -0.05
CBX1P83916 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CBX1P83916 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CBX1P83916 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
CBX1P83916 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
CBX1P83916 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
CBX1P83916 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
CBX1P83916 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms