Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.39□□□□□ -0.43
UBA52P62987 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBA52P62987 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBA52P62987 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
UBA52P62987 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
UBA52P62987 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBA52P62987 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBA52P62987 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.39□□□□□ -0.43
UBA52P62987 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
UBA52P62987 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.39□□□□□ -0.43
UBA52P62987 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.38□□□□□ -0.43
UBA52P62987 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
UBA52P62987 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
UBA52P62987 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.38□□□□□ -0.43
UBA52P62987 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.38□□□□□ -0.43
UBA52P62987 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
UBA52P62987 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
UBA52P62987 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.38□□□□□ -0.43
UBA52P62987 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.38□□□□□ -0.43
UBA52P62987 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
UBA52P62987 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.38□□□□□ -0.43
UBA52P62987 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.38□□□□□ -0.43
UBA52P62987 IGHJ2P-201ENST00000454480 60 ntBASIC12.38□□□□□ -0.43
UBA52P62987 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.38□□□□□ -0.43
UBA52P62987 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.38□□□□□ -0.43
UBA52P62987 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC12.38□□□□□ -0.43
UBA52P62987 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
UBA52P62987 RHOQP1-201ENST00000555758 579 ntBASIC12.38□□□□□ -0.43
UBA52P62987 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.38□□□□□ -0.43
UBA52P62987 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.38□□□□□ -0.43
UBA52P62987 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.38□□□□□ -0.43
UBA52P62987 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.38□□□□□ -0.43
UBA52P62987 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.38□□□□□ -0.43
UBA52P62987 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.38□□□□□ -0.43
UBA52P62987 AC132938.4-201ENST00000623835 848 ntBASIC12.38□□□□□ -0.43
UBA52P62987 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.38□□□□□ -0.43
UBA52P62987 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
UBA52P62987 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.38□□□□□ -0.43
UBA52P62987 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 KHSRPP1-201ENST00000427983 1768 ntBASIC12.38□□□□□ -0.43
UBA52P62987 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.38□□□□□ -0.43
UBA52P62987 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.38□□□□□ -0.43
UBA52P62987 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
UBA52P62987 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.37□□□□□ -0.43
UBA52P62987 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UBA52P62987 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
UBA52P62987 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
UBA52P62987 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBA52P62987 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.37□□□□□ -0.43
UBA52P62987 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms