Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S1P61966 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S1P61966 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
AP1S1P61966 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AP1S1P61966 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S1P61966 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.24□□□□□ -0.13
AP1S1P61966 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AP1S1P61966 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S1P61966 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.24□□□□□ -0.13
AP1S1P61966 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.24□□□□□ -0.13
AP1S1P61966 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S1P61966 KRT8P43-201ENST00000406052 1458 ntBASIC14.24□□□□□ -0.13
AP1S1P61966 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S1P61966 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S1P61966 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S1P61966 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S1P61966 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AP1S1P61966 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AP1S1P61966 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 AL928654.5-201ENST00000624831 2501 ntBASIC14.23□□□□□ -0.13
AP1S1P61966 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
AP1S1P61966 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.23□□□□□ -0.13
AP1S1P61966 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S1P61966 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
AP1S1P61966 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.23□□□□□ -0.13
AP1S1P61966 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S1P61966 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S1P61966 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.23□□□□□ -0.13
AP1S1P61966 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
AP1S1P61966 AL627231.1-201ENST00000394467 1125 ntBASIC14.23□□□□□ -0.13
AP1S1P61966 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.23□□□□□ -0.13
AP1S1P61966 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.23□□□□□ -0.13
AP1S1P61966 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S1P61966 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.23□□□□□ -0.13
AP1S1P61966 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S1P61966 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.23□□□□□ -0.13
AP1S1P61966 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.23□□□□□ -0.13
AP1S1P61966 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.23□□□□□ -0.13
AP1S1P61966 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.23□□□□□ -0.13
AP1S1P61966 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.23□□□□□ -0.13
AP1S1P61966 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 AC051619.9-201ENST00000623237 597 ntBASIC14.23□□□□□ -0.13
AP1S1P61966 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
AP1S1P61966 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
AP1S1P61966 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S1P61966 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
AP1S1P61966 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.23□□□□□ -0.13
AP1S1P61966 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.23□□□□□ -0.13
AP1S1P61966 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
AP1S1P61966 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
AP1S1P61966 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S1P61966 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S1P61966 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.22□□□□□ -0.13
AP1S1P61966 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AP1S1P61966 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.22□□□□□ -0.13
AP1S1P61966 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
AP1S1P61966 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
AP1S1P61966 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
AP1S1P61966 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.22□□□□□ -0.13
AP1S1P61966 MAGEA5-201ENST00000446757 942 ntBASIC14.22□□□□□ -0.13
AP1S1P61966 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms