Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 CICP4-201ENST00000447359 2812 ntBASIC12.74□□□□□ -0.37
CLRN1P58418 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.74□□□□□ -0.37
CLRN1P58418 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLRN1P58418 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CLRN1P58418 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLRN1P58418 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLRN1P58418 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLRN1P58418 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLRN1P58418 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLRN1P58418 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.73□□□□□ -0.37
CLRN1P58418 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.73□□□□□ -0.37
CLRN1P58418 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.73□□□□□ -0.37
CLRN1P58418 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CLRN1P58418 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CLRN1P58418 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 FAM90A7P-201ENST00000382628 1395 ntBASIC12.73□□□□□ -0.37
CLRN1P58418 FAM90A23P-201ENST00000400136 1395 ntBASIC12.73□□□□□ -0.37
CLRN1P58418 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
CLRN1P58418 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.73□□□□□ -0.37
CLRN1P58418 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
CLRN1P58418 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CLRN1P58418 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CLRN1P58418 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.73□□□□□ -0.37
CLRN1P58418 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.73□□□□□ -0.37
CLRN1P58418 XBP1P1-201ENST00000436573 652 ntBASIC12.73□□□□□ -0.37
CLRN1P58418 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.73□□□□□ -0.37
CLRN1P58418 AL591846.1-201ENST00000451736 433 ntBASIC12.73□□□□□ -0.37
CLRN1P58418 HLA-J-204ENST00000495278 958 ntBASIC12.73□□□□□ -0.37
CLRN1P58418 FADS2-212ENST00000522639 360 ntTSL 5 BASIC12.73□□□□□ -0.37
CLRN1P58418 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC12.73□□□□□ -0.37
CLRN1P58418 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.73□□□□□ -0.37
CLRN1P58418 FADS2-215ENST00000574708 385 ntTSL 3 BASIC12.73□□□□□ -0.37
CLRN1P58418 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.73□□□□□ -0.37
CLRN1P58418 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLRN1P58418 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.73□□□□□ -0.37
CLRN1P58418 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CLRN1P58418 AC090164.2-201ENST00000611487 516 ntBASIC12.73□□□□□ -0.37
CLRN1P58418 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 AC130686.1-201ENST00000622936 2466 ntBASIC12.73□□□□□ -0.37
CLRN1P58418 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.73□□□□□ -0.37
CLRN1P58418 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CLRN1P58418 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.73□□□□□ -0.37
CLRN1P58418 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.73□□□□□ -0.37
CLRN1P58418 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CLRN1P58418 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CLRN1P58418 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLRN1P58418 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CLRN1P58418 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.72□□□□□ -0.37
CLRN1P58418 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CLRN1P58418 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CLRN1P58418 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.72□□□□□ -0.37
CLRN1P58418 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.72□□□□□ -0.37
CLRN1P58418 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.72□□□□□ -0.37
CLRN1P58418 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLRN1P58418 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms