Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC041040.2-201ENST00000622926 2899 ntBASIC15.62■□□□□ 0.09
GPC3P51654 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.62■□□□□ 0.09
GPC3P51654 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
GPC3P51654 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.62■□□□□ 0.09
GPC3P51654 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.62■□□□□ 0.09
GPC3P51654 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 SHMT1P1-201ENST00000419974 1312 ntBASIC15.62■□□□□ 0.09
GPC3P51654 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
GPC3P51654 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.62■□□□□ 0.09
GPC3P51654 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.62■□□□□ 0.09
GPC3P51654 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
GPC3P51654 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.61■□□□□ 0.09
GPC3P51654 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.61■□□□□ 0.09
GPC3P51654 PPP1R2P4-201ENST00000424051 595 ntBASIC15.61■□□□□ 0.09
GPC3P51654 AC098934.1-203ENST00000442868 1262 ntBASIC15.61■□□□□ 0.09
GPC3P51654 AC018638.5-201ENST00000450885 754 ntBASIC15.61■□□□□ 0.09
GPC3P51654 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.61■□□□□ 0.09
GPC3P51654 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.61■□□□□ 0.09
GPC3P51654 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 CHCHD2P2-201ENST00000503744 321 ntBASIC15.61■□□□□ 0.09
GPC3P51654 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.61■□□□□ 0.09
GPC3P51654 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 AP000911.2-201ENST00000534330 502 ntBASIC15.61■□□□□ 0.09
GPC3P51654 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
GPC3P51654 HERC2P11-201ENST00000562845 725 ntBASIC15.61■□□□□ 0.09
GPC3P51654 AC100756.2-201ENST00000569537 736 ntBASIC15.61■□□□□ 0.09
GPC3P51654 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
GPC3P51654 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
GPC3P51654 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.61■□□□□ 0.09
GPC3P51654 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GPC3P51654 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
GPC3P51654 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC3P51654 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.6■□□□□ 0.09
GPC3P51654 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC3P51654 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
GPC3P51654 AL359881.3-201ENST00000602640 1721 ntBASIC15.6■□□□□ 0.09
GPC3P51654 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC3P51654 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
GPC3P51654 RPL13AP3-202ENST00000494676 1473 ntBASIC15.6■□□□□ 0.09
GPC3P51654 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC3P51654 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
GPC3P51654 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.6■□□□□ 0.09
GPC3P51654 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.6■□□□□ 0.09
GPC3P51654 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms