Protein–RNA interactions for Protein: P48728

AMT, Aminomethyltransferase, mitochondrial, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMTP48728 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC10.77□□□□□ -0.68
AMTP48728 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
AMTP48728 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
AMTP48728 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
AMTP48728 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC10.77□□□□□ -0.69
AMTP48728 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC10.77□□□□□ -0.69
AMTP48728 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
AMTP48728 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC10.77□□□□□ -0.69
AMTP48728 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
AMTP48728 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
AMTP48728 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
AMTP48728 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.77□□□□□ -0.69
AMTP48728 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.77□□□□□ -0.69
AMTP48728 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 DNAJB3-201ENST00000446806 729 ntBASIC10.77□□□□□ -0.69
AMTP48728 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.77□□□□□ -0.69
AMTP48728 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC10.77□□□□□ -0.69
AMTP48728 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 POLD2P1-201ENST00000511220 997 ntBASIC10.77□□□□□ -0.69
AMTP48728 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.77□□□□□ -0.69
AMTP48728 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.77□□□□□ -0.69
AMTP48728 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.77□□□□□ -0.69
AMTP48728 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
AMTP48728 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.77□□□□□ -0.69
AMTP48728 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.77□□□□□ -0.69
AMTP48728 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.77□□□□□ -0.69
AMTP48728 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
AMTP48728 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC10.77□□□□□ -0.69
AMTP48728 TUBB8P4-201ENST00000511806 1324 ntBASIC10.77□□□□□ -0.69
AMTP48728 HNRNPMP1-201ENST00000560685 1768 ntBASIC10.77□□□□□ -0.69
AMTP48728 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC10.77□□□□□ -0.69
AMTP48728 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
AMTP48728 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
AMTP48728 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.76□□□□□ -0.69
AMTP48728 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.76□□□□□ -0.69
AMTP48728 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC10.76□□□□□ -0.69
AMTP48728 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC10.76□□□□□ -0.69
AMTP48728 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
AMTP48728 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC10.76□□□□□ -0.69
AMTP48728 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC10.76□□□□□ -0.69
AMTP48728 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.76□□□□□ -0.69
AMTP48728 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC10.76□□□□□ -0.69
AMTP48728 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC10.76□□□□□ -0.69
AMTP48728 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
AMTP48728 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
AMTP48728 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
AMTP48728 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC10.76□□□□□ -0.69
AMTP48728 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
AMTP48728 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
AMTP48728 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
AMTP48728 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
AMTP48728 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms